Protein

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Genbank accession
YP_004327219.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,91
TF
Evidence RBPdetect2
Probability 0,52
Protein sequence
MADIGQLPIENIWSTGGDMVAPTPAQQQGGWGIQSVPRQWWNWKWNLHDTNLAYLLQKGIPEWTSTQEYIANKSFCTRGGFVYKAVRTHTGSDPAQVSANWARAFADYTTASSALGSLTPREGGIPFFLSATGAGVFDSTAYGRDMLNVANAAGARNYIAAQESSIILSNLAAVTRAANSVPYFNTDTSMATFNITAYGRGLVNAANAENARSFLGLANSAIITADPANRAHTLVYRDAAGNFNAGVITATLSGNATTANKLRTPVTINGVPFDGSSNIVLPGLDTSYAGTVARLHVNGANMTGTDKTTQIALRNKSDNDWISLAVVDDNILQFVFRSATNPIVQIGSEVVLHTGNQFSLGPTLSDARSRLGLDRLSQGSSDTVVFSSVLNNGPYLTVQPSSIGGFDGAANNWMFRFDANGNLTHGTVPVARITGLANSATIPAVTTAQANSLVQRDGNGSFSAIGINAYGAIIGYGSNIYSRASASGGNAHIGFQRADGTELGLIWGIPSSGAMSFRTSGGTTGMTLTGQDLLVAGRVNAATLNASGNVNATGNVNAGSATLNTAGNITGAAYGAYGSLTNWVDSVYAKKGEIPNDIARAGAAWDAVGQYILAGDQSGGSGGPGTTRAGSQLKPYSTISYTAGALPAAGTYRCMGAFAGGGNQITLWQRIS
Physico‐chemical
properties
protein length:672 AA
molecular weight: 69619,39810 Da
isoelectric point:8,35982
aromaticity:0,08482
hydropathy:-0,06979

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_004327219.1
1 672
Domain Start End Length (AA) Confidence
N-terminal 1 313 313 0,6304
Central domain 314 512 200 0,2734
C-terminal 513 672 159 0,8120
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-313
Central
314-512
C-terminal
513-672

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage PAK_P1
[NCBI] 		743813 Uroviricota > Caudoviricetes > Vandenendeviridae > Pakpunavirus > Pakpunavirus PAKP1
Host Pseudomonas aeruginosa PAK
[NCBI] 		1009714 Bacteria > Proteobacteria > Gammaproteobacteria > Pseudomonadales > Pseudomonadaceae > Pseudomonas

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_004327219.1 [NCBI]
Genbank nucleotide accession
NC_015294.2 [NCBI]
CDS location
range 19086 -> 21104
strand +
CDS
ATGGCTGATATCGGTCAACTACCTATTGAAAATATTTGGTCCACAGGCGGGGATATGGTAGCCCCGACCCCAGCCCAGCAACAAGGCGGATGGGGAATTCAATCGGTTCCTCGTCAATGGTGGAACTGGAAATGGAACCTGCACGATACCAACCTAGCTTATCTGCTACAAAAGGGTATCCCGGAGTGGACTAGTACTCAAGAGTACATTGCAAACAAATCGTTCTGCACCCGAGGAGGGTTTGTTTACAAAGCTGTACGTACACACACAGGAAGCGATCCAGCCCAAGTTAGTGCAAACTGGGCGAGAGCTTTCGCAGATTATACGACAGCTAGCTCTGCTCTTGGAAGCTTGACCCCAAGAGAGGGTGGAATCCCATTCTTCCTGAGCGCTACAGGTGCTGGAGTATTTGACTCTACAGCTTATGGCCGTGACATGCTGAACGTAGCCAACGCGGCAGGAGCTAGGAACTACATCGCGGCCCAAGAAAGTTCTATCATTCTGTCTAACCTAGCTGCTGTAACGCGAGCTGCTAACTCTGTACCGTACTTCAATACGGACACGTCCATGGCAACATTCAACATCACAGCATATGGCCGTGGTCTTGTGAATGCTGCTAACGCGGAAAACGCAAGAAGCTTCCTAGGTCTAGCTAACTCTGCTATCATCACGGCCGATCCGGCGAACAGGGCTCATACCCTCGTCTACCGCGATGCTGCTGGAAACTTCAACGCAGGTGTGATTACGGCTACGCTTTCTGGTAACGCGACTACAGCTAATAAGCTTAGAACTCCCGTAACTATTAACGGTGTTCCATTCGACGGAAGTTCGAATATTGTTCTCCCCGGTCTTGACACAAGCTATGCTGGAACAGTAGCTAGGCTCCACGTTAATGGTGCCAACATGACTGGAACGGACAAAACGACTCAAATTGCTCTGAGAAACAAATCGGACAACGATTGGATCAGTCTTGCAGTAGTCGATGACAACATCCTTCAGTTTGTTTTCAGAAGTGCAACAAACCCAATCGTGCAGATCGGTAGTGAAGTTGTCCTGCACACTGGTAACCAATTCTCCCTTGGACCTACTCTGAGCGATGCACGCAGCCGACTAGGCCTTGATAGGCTGTCTCAAGGGTCTTCTGATACAGTTGTGTTCTCCAGTGTTCTGAACAACGGACCATATCTAACTGTTCAGCCGTCTAGCATCGGAGGTTTCGACGGTGCTGCCAATAACTGGATGTTCCGTTTTGATGCGAATGGTAACCTGACTCATGGAACTGTTCCGGTTGCAAGGATTACAGGGCTAGCCAACTCTGCTACAATTCCTGCCGTAACCACTGCTCAGGCTAACTCTCTTGTCCAGAGAGACGGAAATGGAAGTTTCAGCGCTATTGGAATTAACGCCTACGGAGCCATCATTGGGTACGGCTCTAACATCTACAGCCGTGCTTCCGCATCTGGAGGCAACGCTCATATCGGATTCCAAAGGGCAGATGGTACTGAGCTAGGACTCATCTGGGGTATTCCTTCCAGCGGAGCTATGAGCTTCCGCACATCGGGTGGAACAACTGGTATGACCCTGACAGGGCAAGATTTGCTTGTCGCCGGAAGAGTTAATGCTGCAACCTTAAACGCCTCTGGTAACGTCAACGCTACAGGGAACGTTAACGCTGGTTCTGCTACTCTGAACACAGCAGGTAACATCACAGGGGCCGCCTACGGAGCGTATGGTTCTCTTACCAACTGGGTAGATTCTGTATATGCGAAGAAGGGAGAGATTCCTAACGATATCGCTAGAGCAGGCGCAGCTTGGGACGCAGTTGGACAGTACATCCTAGCTGGCGATCAATCTGGAGGGTCTGGTGGACCGGGGACAACTAGAGCTGGAAGCCAGTTGAAGCCTTATTCGACTATTAGCTACACAGCAGGGGCACTACCAGCAGCAGGCACTTACAGATGTATGGGAGCGTTTGCAGGTGGTGGTAACCAGATTACCCTGTGGCAGAGAATTTCTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
01fe85787b663d7fb9e307897dedc2d76d57f3fb1b7bc4ae90934092e0a19471
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6486
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50