Protein

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Genbank accession
YP_010662134.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,75
TF
Evidence RBPdetect2
Probability 0,93
Protein sequence
MVNVTPISPIVPGDTSVGDSVAKANDVFSRIVEQGQAVNGLLVDVGDKASLQTSVKTNLVAAINEILVRFNDGFLVENITGLLADLDTTNKTNLVGAINEVVGDVGDLDALQSVNKSSIVAAINEILTENAGVGNLQNLSTIDKSNIVSAINELSLSIGSFSNLSGYQDIVSAINEISDDIGDRDELETTVKNNLVVAINEIVSKYELFVAKDGSTAFTGNVNLDNHKVINLAPGTNPNDAVTVAQIPELVKLGDVDSLSTSTKENAVLAINEVVGYIGQLNLLNTTVKTNIVAAINEIVANIDYQDMQTKLSGETLIKFGSTVNSDHDQIFDFRSSSVTGPTSYDLRIIRESGSNGEARIIQNGSGQTFISTNDEINGVIDRIRVNADVGNPFEIYKDGVWVAVATGGASLPLVGGTMTGPIQFNKILSSNNILMDLQQGYAIYSDDVGTYDSSVSRLWIDGPSIGEIHIGPKTTGNLRGIELRTDRLDVTGEIFSSSDITLLSDERVKSEIETIDDGLEKVYAMRGVHYIKDGKFSTGVIAQELEKIAPELVKDAGELKAVNYPQLTAYLIEAVKDLVDQVNDLNRRIITLENNQ
Physico‐chemical
properties
protein length:597 AA
molecular weight: 63935,80050 Da
isoelectric point:4,35037
aromaticity:0,04858
hydropathy:-0,03199

Domains

Domains [InterPro]
DC_1369
ATT
1–80
DC_1369 DC_1369 DC_0811 IPR051577
DC_0811
STR
68–133
DC_0811 DC_0811 DC_0203
IPR030392
CHP
505–555
IPR030392 Coil
IPR030392
CHP
505–590
IPR030392
YP_010662134.1
1 597
Architecture
ATT
STR
ATT
STR
RBD
ATT 1-80 | STR 81-126 | ATT 127-167 | STR 168-438 | RBD 490-597
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Rhizobium phage P9VFCI
[NCBI] 		2763531 Uroviricota > Caudoviricetes > Pootjesviridae > Innesvirus P9VFCI >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010662134.1 [NCBI]
Genbank nucleotide accession
NC_070886.1 [NCBI]
CDS location
range 144535 -> 146328
strand +
CDS
ATGGTTAACGTAACTCCAATTTCGCCTATCGTTCCAGGTGACACTTCTGTCGGTGATTCCGTCGCGAAAGCGAACGACGTCTTCAGCAGAATTGTAGAACAAGGACAGGCAGTCAACGGTCTTCTGGTCGACGTCGGTGACAAGGCTTCACTCCAAACCAGTGTCAAGACGAACCTCGTAGCAGCGATCAACGAGATCCTGGTTCGCTTCAATGACGGTTTCCTCGTCGAGAACATCACGGGTCTTCTCGCAGATCTCGACACGACTAACAAGACGAACCTTGTCGGTGCTATCAATGAGGTTGTCGGAGACGTAGGAGATCTCGACGCTCTCCAGTCTGTCAACAAATCGAGCATCGTGGCTGCGATCAACGAGATCCTGACCGAGAACGCTGGTGTCGGCAATCTTCAGAACCTCTCCACGATCGACAAATCGAACATCGTTTCTGCGATCAACGAACTGTCTCTGAGTATCGGATCGTTCTCGAACCTCTCTGGCTACCAGGACATCGTCTCCGCTATCAACGAAATCTCTGACGACATCGGAGATCGAGACGAACTGGAGACGACTGTCAAGAACAACCTGGTTGTCGCTATCAACGAGATCGTTTCAAAGTACGAACTCTTCGTGGCGAAAGACGGTTCGACTGCATTCACTGGCAACGTGAACCTCGACAACCACAAGGTCATCAACCTCGCTCCTGGCACGAACCCGAACGACGCTGTCACTGTAGCTCAGATCCCTGAACTCGTGAAGCTCGGCGACGTAGACAGTCTGTCCACTTCTACGAAGGAAAATGCTGTCCTCGCTATCAACGAGGTCGTCGGCTACATCGGTCAGCTCAATCTGCTGAATACGACTGTGAAGACGAACATCGTGGCTGCCATCAACGAGATCGTTGCCAACATCGACTATCAAGACATGCAGACCAAGCTGTCTGGAGAGACTCTGATCAAGTTCGGTTCTACAGTCAACAGCGATCACGATCAGATTTTCGACTTCCGTTCGTCCTCTGTCACAGGTCCTACGAGCTACGATCTTCGTATCATCCGTGAGAGTGGTTCGAACGGCGAAGCCCGTATCATCCAGAACGGCAGCGGCCAGACATTCATCTCGACTAATGACGAAATCAACGGTGTCATCGATCGAATTCGAGTCAACGCTGATGTAGGCAATCCGTTCGAAATCTACAAGGACGGTGTCTGGGTTGCGGTCGCTACTGGCGGTGCTTCACTTCCTCTGGTCGGCGGCACGATGACTGGTCCGATCCAGTTCAACAAGATCCTCAGCTCGAACAACATTCTGATGGATCTCCAGCAGGGTTACGCCATCTATTCTGATGACGTCGGCACTTACGACAGCTCTGTCAGCCGCCTCTGGATCGACGGTCCTTCTATCGGCGAAATTCACATCGGTCCGAAGACCACAGGCAATCTTCGCGGTATCGAACTTCGAACTGATCGACTCGACGTCACAGGCGAGATCTTCTCGTCAAGCGACATCACGTTGCTCTCTGACGAACGAGTGAAATCTGAAATCGAGACTATCGATGACGGACTTGAGAAAGTGTATGCCATGCGCGGTGTCCACTACATCAAGGACGGCAAGTTCTCCACTGGTGTCATCGCACAGGAACTCGAGAAGATCGCTCCTGAACTTGTCAAGGATGCTGGTGAGCTCAAGGCCGTGAACTATCCGCAGCTCACTGCTTATCTCATCGAAGCCGTGAAAGATCTCGTCGATCAAGTGAACGACCTCAACCGCCGCATCATCACGTTGGAGAACAATCAGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
fed5d89b1ee7d85e6afb308b939dd74b75707e1d73f75609e96a58367b88b5c6
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6783
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of Rhizobium leguminosarum bacteriophage vB_RlegM_P9VFCI Gunathilake,D., Bhat,S., Yost,C.K. and Hynes,M.F. 2020-03-12 — GenBank