Protein

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Genbank accession
QWY83581.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,58
Protein sequence
MPSAVLPSTYYQGTCTIAAAGTAVTGQNTFWLNAVMPGDFFGVHKGFAIRIASVNSDTSLTLAAAWPGAAQTAAAYEIMLCPDMARVQETTRQLLQTLAGGNVQSFAGLVSAADKLPYFTGSGTMALADLPAYARTLLANTTGPLFYADLGEIPNAQLPGRLQASHAAATDANDCVESGWYRVTSGTANIPEGAQGSLFVAQVLSGSYCQIYMRSSNGNFWSRTSISGVWGAWVKSVDYGDILGTVSHSGGVPTGAIIERGSNANGEYIKFADGTQICTLPGTLQSGAIDSPGGSLFLNTGGTIVWTYPIAFSTAASVVPLGSNARASARWVSAVGTSAAGANFRVYSYASNATSLPFDVMAIGRWY
Physico‐chemical
properties
protein length:367 AA
molecular weight: 38079,30490 Da
isoelectric point:5,57161
aromaticity:0,10354
hydropathy:0,16839

Domains

Domains [InterPro]
DC_0857
STR
38–367
DC_0857
cd19958
STR
168–235
cd19958
QWY83581.1
1 367
Architecture
STR
STR 38-367
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QWY83581.1
1 367
Domain Start End Length (AA) Confidence
N-terminal 1 138 138 0,9918
Central domain 139 337 200 0,0063
C-terminal 338 367 29 0,9993
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-138
Central
139-337
C-terminal
338-367

Taxonomy

  Name Taxonomy ID Lineage
Phage Rhizobium phage RHph_X2_26
[NCBI] 		2836080 No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QWY83581.1 [NCBI]
Genbank nucleotide accession
MW960037.1 [NCBI]
CDS location
range 21472 -> 22575
strand +
CDS
ATGCCTAGCGCGGTTCTTCCGTCAACATACTATCAGGGAACGTGCACCATTGCCGCCGCCGGAACGGCCGTGACGGGGCAAAACACGTTCTGGCTTAATGCCGTCATGCCGGGAGACTTTTTCGGCGTGCACAAGGGCTTTGCTATCCGCATTGCGTCCGTCAACAGCGACACGAGCTTGACACTTGCGGCCGCGTGGCCCGGCGCAGCGCAGACAGCGGCAGCATATGAAATCATGCTGTGCCCGGATATGGCGCGCGTGCAAGAGACGACGCGGCAATTGCTACAAACGCTCGCGGGCGGCAATGTGCAGTCGTTTGCGGGGCTCGTGAGCGCGGCCGACAAGCTGCCCTATTTCACGGGCTCCGGAACGATGGCGCTAGCGGACCTCCCGGCTTACGCGCGCACGTTGCTCGCGAACACTACCGGGCCGCTTTTCTATGCGGACCTTGGGGAAATTCCCAACGCACAGTTGCCCGGCAGGTTGCAGGCATCGCATGCAGCGGCGACAGATGCAAATGATTGCGTGGAGTCCGGCTGGTATCGCGTGACGTCTGGCACGGCAAACATTCCGGAAGGCGCGCAGGGCTCCTTGTTCGTTGCTCAAGTCCTGAGCGGCTCCTACTGCCAAATATACATGCGCTCGTCAAACGGCAATTTCTGGAGCCGGACGTCAATCTCCGGGGTTTGGGGCGCTTGGGTTAAGAGTGTTGACTATGGCGATATTTTGGGAACGGTCTCGCATTCCGGCGGCGTTCCGACAGGCGCCATTATCGAGCGAGGGAGCAACGCGAACGGGGAGTATATAAAATTTGCGGACGGCACGCAAATATGCACTCTGCCGGGAACACTTCAAAGTGGAGCCATCGACTCCCCCGGCGGCTCGCTGTTCCTGAATACGGGCGGCACTATAGTTTGGACGTATCCTATAGCGTTCTCCACGGCCGCAAGCGTCGTGCCGCTTGGCTCAAATGCGCGCGCGTCGGCGAGGTGGGTTTCAGCAGTCGGAACAAGCGCTGCGGGCGCAAACTTTCGCGTCTATAGCTACGCGAGCAATGCAACGTCACTGCCGTTTGATGTTATGGCAATAGGAAGGTGGTATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
9a1d8324fedb046d8f6302018a9ae4b2ae5778b6164c5a1c9028dd875e521f90
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8516
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The Hidden Diversity and Expansion of Phages in the Symbiotic Bacteria Rhizobium Gonzalez,V., Santamaria,R.I., Bustos,P., Cauwenberghe,J.V. and Juarez,S. 2017-09-25 — GenBank