Protein

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Genbank accession
QDH85507.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MSKINRTVLHNNVPTVQLFSTGGCVRSYNDFFMDTESNLWKYTGVLPVTVPPNTTPESTEWLQITNKPQDTKEGYKPVVHFRDLGGTDGLNTGLYKIAHDFCNTHKLSLSYEGMNLIIEDRNIVVTTPTVFKCTITVRINQSNKGEDVFLFQGGSYSSKNLSFNYDEYSDRPFSNVLDVPELSFIKWKPIVPHFNGGDKAIQEMCVHTSGGGVVGRTYSAYTGTTEVYYRSIGTTSFKFEGLTVHVQDTTPSTSTGYFEIFKITDLDSVYISDFSTGTQSPVNNPKVYFGISNCYGVFISDVRTTGTYSKNSGTYGYIFNIVDCINVNFSDITGNVVTKDWWTLYGANRVKVINHHNCHFYRYDNHSFVQDVSASNCTTRGTALSGNGYRRFRDCDFVFSSEEDNGNLLYLRGVSSNGDYSSFNGDISIVGGSISGNPKDFYVFAGSALGASVSLNNEVFNSLVIDGVNFDRLKPSVSASVFPNRSMNRTLFRRFEMRNCTIPIKFAGFSRHDHAFVQEDGTQPCSTIDFNNVKFRAVQDYEDVNSKRFEMSAQLPVNSKCTVSFSNCTNVGFWGSYCTVQVHSSTLNAVRCTQTNSTDTIKFFSCVVLNWVSDNFLLDNTKVSSYSCSADGKLLTSSSSTGTYTYLTNLSTLHSMHLVLNSVYPSEGAAKTFATPYSTFLVVGSGVKYKSTAENPLAHLG
Physico‐chemical
properties
protein length:701 AA
molecular weight: 77800,82950 Da
isoelectric point:6,49547
aromaticity:0,12553
hydropathy:-0,26148

Domains

Domains [InterPro]
PS51257
STR
1–24
PS51257
DC_0018
ATT
6–171
DC_0018
G3DSA:2.10.10.80
ATT
13–67
G3DSA:2.10.10.80
QDH85507.1
1 701
Architecture
ATT
ATT 1-171 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QDH85507.1
1 701
Domain Start End Length (AA) Confidence
N-terminal 1 92 92 0,9905
Central domain 93 613 522 0,9438
C-terminal 614 701 87 0,9301
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-92
Central
93-613
C-terminal
614-701

Taxonomy

  Name Taxonomy ID Lineage
Phage Proteus phage vB_PmiP_RS8pmA
[NCBI] 		2250314 Uroviricota > Caudoviricetes > Autographivirales > Slopekvirinae > Novosibovirus
Host Proteus mirabilis
[NCBI] 		584 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QDH85507.1 [NCBI]
Genbank nucleotide accession
MG575419.1 [NCBI]
CDS location
range 40201 -> 42306
strand +
CDS
ATGAGTAAAATTAATAGAACAGTCTTACATAACAATGTACCCACTGTACAACTATTCAGTACTGGTGGTTGTGTTAGAAGTTATAATGATTTCTTTATGGATACAGAATCTAATTTATGGAAGTACACAGGTGTATTACCAGTCACTGTACCACCCAACACAACACCAGAGAGTACCGAGTGGTTGCAGATAACTAACAAACCACAAGATACTAAGGAGGGGTACAAACCCGTCGTACACTTTCGGGATTTGGGAGGTACAGACGGATTAAACACTGGTCTGTACAAAATAGCACATGATTTTTGTAACACTCATAAATTAAGCCTTTCGTACGAAGGTATGAATTTAATTATAGAAGATAGGAACATTGTAGTTACTACACCTACGGTATTTAAATGTACTATTACTGTACGTATTAACCAATCCAACAAAGGGGAAGATGTGTTCCTGTTCCAAGGGGGTTCGTACAGTTCTAAGAATCTAAGTTTTAATTATGATGAGTACTCAGATAGACCTTTTAGTAATGTACTAGATGTGCCTGAACTATCCTTTATAAAATGGAAACCGATAGTACCCCATTTTAATGGTGGGGATAAGGCTATTCAAGAAATGTGCGTACATACATCAGGTGGAGGTGTTGTTGGTAGGACTTACAGTGCTTACACGGGTACTACAGAGGTGTATTACCGAAGTATAGGTACAACATCATTTAAATTTGAAGGGCTTACTGTGCATGTCCAAGACACTACACCAAGTACTTCTACTGGTTATTTTGAGATATTTAAAATTACTGACTTAGATAGTGTGTACATTAGTGATTTTAGTACAGGTACACAATCCCCAGTAAACAACCCTAAAGTGTATTTTGGTATTAGTAACTGCTATGGGGTATTCATTAGTGATGTGCGAACTACTGGGACTTACTCTAAGAACAGTGGAACGTACGGGTACATCTTCAATATTGTAGATTGTATTAATGTGAACTTCTCTGATATTACTGGTAATGTAGTTACTAAAGATTGGTGGACACTGTACGGTGCTAACCGTGTTAAAGTTATTAATCATCATAACTGTCATTTCTATCGTTATGATAACCATTCCTTTGTACAAGATGTTAGTGCTAGTAATTGTACTACTAGAGGTACTGCTTTATCAGGTAATGGGTACAGACGTTTTAGGGATTGTGATTTTGTATTCTCTAGTGAGGAGGATAATGGGAACTTACTGTACTTACGTGGGGTTAGTTCTAATGGGGATTACAGTAGCTTTAACGGGGATATTAGTATAGTAGGTGGCTCTATTTCAGGAAACCCAAAAGACTTTTATGTGTTCGCAGGTTCAGCATTAGGTGCATCTGTTTCATTGAACAATGAAGTATTTAATTCATTAGTTATTGACGGGGTTAACTTTGACAGGCTTAAACCTAGTGTGTCAGCGAGTGTGTTCCCGAATCGTAGTATGAACCGGACCTTGTTTAGACGTTTTGAAATGAGAAACTGTACTATCCCAATCAAGTTCGCTGGATTCTCTAGACATGATCATGCGTTTGTACAGGAAGATGGTACACAACCTTGTAGTACTATTGATTTTAATAATGTTAAATTCAGGGCTGTGCAGGATTACGAGGATGTGAATTCCAAGCGATTTGAAATGTCAGCGCAATTACCTGTTAATTCTAAGTGTACGGTCTCATTTAGTAACTGTACTAATGTGGGATTCTGGGGTAGTTACTGTACTGTACAAGTGCATTCTAGTACACTTAATGCAGTGAGGTGCACACAAACTAATAGTACTGATACAATTAAGTTCTTTAGTTGTGTGGTTCTGAACTGGGTGTCAGATAACTTCCTCTTAGATAATACTAAGGTTAGCTCCTACTCATGCAGTGCAGATGGTAAGCTTTTAACTAGCTCTAGTAGTACAGGGACTTACACGTACTTAACTAACCTAAGTACTCTACACAGTATGCACCTAGTGCTCAATAGTGTGTACCCGAGTGAGGGAGCTGCTAAGACCTTTGCTACACCGTACAGTACCTTTCTAGTAGTTGGGTCAGGGGTGAAGTACAAGAGCACAGCAGAGAACCCTCTAGCACATCTAGGGTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
17d79f09f612239a44955064c351884fa5abc93e0e2cfc8109ff8fb188dbe845
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6535
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genomic and ecogenomic characterisation of Proteus mirabilis bacteriophage to support development of cocktails for phage therapy Alves,D.R., Nzakizwanayo,J., Dedi,C., Olympiou,C., Hanin,A., Kot,W., Hansen,L., Gahan,C., Schellenberge,P., Ogilvie,L.A. and Jones,B.V. 2019-08-06 — GenBank