Protein

View in Explore
Genbank accession
QBX23186.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,87
TF
Evidence RBPdetect2
Probability 0,94
Protein sequence
MTSVETIPIKIVFDRKDASEWQSTNPVIDEGEMVVELDTHKLKVGDGKLNYNDLPYYEGPQGESITKVQLSENGDLSVWIGDKETKLGNIKGQKGDEGTSITDITKDGETLTIKLSDDTQKNFNIPNGQKGDRGKSVESARVDEDGNLFVKFEEESEKLLGNLKGAKGDKGDPLKFEDLTPDQIAQIKAKDVDLSSYVTKTELAKIDVSKQLKDYLSKTDAERTYLKKSDKVELPTDLVKTGDIADVVRKPDLTAYATKDELKKVSIGQAIPTFTTSYQYDNSYLRSYSEPGYRGTWSVNEDASKLIPGDIIALEVTNTSYYNKNYIIATVVSSTRSTITSLSRELAQDKPSDTTFLSQKEADKIYATKKHKHEIDDINGLQATLNNKAGAQHSHSEYLEQATADRLYLAKGTLPRDVVTSDTLAGYLAGYARVADIKSQLDNIGKLKDTKTGQFLDVMVVDKGQVPSFTGGMIVFERA
Physico‐chemical
properties
protein length:479 AA
molecular weight: 52922,51920 Da
isoelectric point:5,09746
aromaticity:0,06889
hydropathy:-0,63006

Domains

Domains [InterPro]
SSF69349
STR
9–226
SSF69349 DC_0679
IPR041352
ATT
18–48
IPR041352
DC_0679
STR
32–355
DC_0679
QBX23186.1
1 479
Architecture
ATT
STR
ATT 9-48 | STR 49-477 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Streptococcus phage Javan118
[NCBI] 		2547987 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Streptococcus dysgalactiae
[NCBI] 		1334 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Lactobacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QBX23186.1 [NCBI]
Genbank nucleotide accession
MK448845.1 [NCBI]
CDS location
range 27750 -> 29189
strand +
CDS
ATGACATCAGTCGAAACAATACCAATAAAAATCGTCTTTGACCGCAAAGATGCCTCAGAATGGCAGTCTACTAACCCTGTCATTGATGAAGGGGAGATGGTCGTAGAGCTAGACACTCATAAATTGAAAGTCGGAGATGGCAAACTGAATTATAACGACCTGCCGTACTATGAAGGTCCGCAAGGAGAATCGATCACCAAAGTACAGCTATCCGAAAATGGAGACTTATCTGTATGGATTGGGGATAAAGAGACTAAGCTCGGCAATATCAAAGGTCAAAAAGGTGACGAAGGTACAAGTATTACTGACATCACCAAGGATGGTGAGACACTGACAATCAAACTATCAGACGACACTCAAAAAAACTTTAATATCCCTAATGGCCAAAAAGGGGATAGAGGTAAGAGCGTAGAGAGCGCTCGGGTTGACGAGGACGGGAACCTTTTTGTCAAGTTTGAAGAAGAATCGGAAAAACTTCTTGGTAACCTAAAAGGCGCCAAAGGAGATAAAGGAGATCCATTAAAATTTGAAGACCTTACTCCTGACCAAATCGCTCAAATTAAAGCTAAAGATGTTGACTTGTCGAGTTATGTCACAAAAACAGAGCTAGCAAAGATTGACGTAAGCAAACAGCTTAAAGACTATCTATCTAAAACAGATGCTGAACGGACATATCTTAAAAAATCGGATAAGGTTGAGTTACCAACTGATTTAGTCAAAACTGGTGATATTGCGGATGTTGTTCGTAAACCAGATTTAACTGCTTATGCAACAAAAGATGAGCTAAAAAAAGTGTCAATTGGACAAGCTATTCCTACATTTACCACTAGCTATCAATACGATAATAGTTATCTTAGATCATACAGCGAACCTGGTTATCGCGGTACATGGTCAGTCAATGAGGATGCTAGTAAATTAATACCTGGCGATATCATAGCGCTTGAGGTGACAAATACTAGCTACTATAACAAAAATTACATTATCGCTACTGTTGTGTCCTCAACGCGATCAACTATCACCTCTCTAAGCAGAGAGCTAGCTCAAGATAAGCCATCAGATACAACATTTTTATCTCAAAAAGAGGCAGATAAAATCTATGCTACTAAGAAACATAAGCATGAGATTGATGATATTAATGGCTTACAAGCTACATTAAATAACAAAGCCGGTGCTCAACATAGCCACAGCGAATATCTCGAACAAGCAACTGCCGATAGATTGTATCTAGCAAAAGGCACTCTGCCAAGAGATGTCGTTACATCAGATACACTAGCTGGTTATCTAGCTGGATACGCTAGAGTAGCTGACATAAAAAGTCAATTGGATAACATCGGTAAGCTAAAAGACACAAAAACAGGTCAATTTTTAGATGTGATGGTTGTTGATAAAGGACAAGTACCGAGTTTTACAGGTGGCATGATTGTGTTTGAGAGGGCTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
c872886da821c85f8cff05f1e7f14e754301ba8dbafe453f99eb44a23477024a
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7557
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Prophages and satellite prophages are widespread among Streptococcus species and may play a role in pneumococcal pathogenesis Rezaei Javan,R., Ramos-Sevillano,E., Akter,A., Brown,J. and Brueggemann,A.B. 2018-12-20 — GenBank