Protein

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Genbank accession
YP_012812079.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MLTQFAQPKGSTIGLLKDGRTVEEAILELTTLTTNGAQAVSPKGFGAVAGQDATLAINSAATAAAAQGKALDLRGGPWKVSGTLDFTNVRTVVSDASGTIIVDNDNFTSKFTNRYAITFGNPDVAWGSGRTAHTQVLGTLVVNSMTRTTPLHGIYFKGSWFGVGVVRANGFNGSAVTLEAVWDSIFGSMSGELSGNITDYQIDVRGGGDTSNCIFIGRIQSERAYHKCLRLSAIRSVFNTIHAERTAVLTIDDGTTLADGVTKYTTFHLNLGNSVVNQLIHDAITGNAPDGQPTVGVASARLDMDYSNLNAAALGSCIVNTNSGRNSQFTSVVAQKWTFSSTATNNVISNVLIADNLAAANTTTFVGGTIETLTPRFNASDLLFDNVAIKQLNFAADIKGNIRFRACRFPETMTIGTTRAPEGYSATSTLGETNLPVTFENCILLGTFVGAFQSRAVWEGGYIKAVNLVSRAAVEFYGTAMGSFDCTGDTAYVTRQCRASTASNWARTTHVAYPIGTITERLGVDSGAAGLAFRNTDGTANGWTKIY
Physico‐chemical
properties
protein length:547 AA
molecular weight: 57830,07610 Da
isoelectric point:6,66337
aromaticity:0,08592
hydropathy:0,00548

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_012812079.1
1 547
Domain Start End Length (AA) Confidence
N-terminal 1 53 53 0,9749
Central domain 54 488 436 0,9930
C-terminal 489 547 58 0,9524
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-53
Central
54-488
C-terminal
489-547

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage Amrap
[NCBI] 		3018530 Uroviricota > Caudoviricetes > Autographivirales > Studiervirinae > Przondovirus
Host Klebsiella oxytoca
[NCBI] 		571 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_012812079.1 [NCBI]
Genbank nucleotide accession
NC_111672 [NCBI]
CDS location
range 35979 -> 37622
strand +
CDS
ATGTTAACTCAGTTCGCACAACCAAAAGGTTCTACCATCGGTCTACTGAAAGATGGTCGTACCGTTGAGGAAGCGATTCTTGAGCTGACCACTCTGACAACCAATGGGGCACAAGCTGTGTCCCCTAAAGGTTTCGGCGCAGTGGCTGGACAAGATGCAACCCTCGCAATCAACTCAGCAGCAACCGCAGCGGCAGCTCAGGGTAAGGCTCTGGACCTCCGTGGAGGCCCTTGGAAGGTGTCCGGTACTCTGGACTTCACCAACGTCCGTACAGTCGTGTCGGATGCCTCAGGGACCATTATCGTCGATAACGACAACTTCACCAGTAAGTTCACCAACCGTTACGCTATCACCTTCGGTAACCCTGATGTAGCGTGGGGATCTGGACGCACCGCCCACACTCAGGTTCTAGGGACTCTGGTGGTGAACTCGATGACCCGCACGACTCCTCTCCACGGCATCTACTTCAAGGGTAGCTGGTTCGGTGTTGGCGTTGTGCGTGCCAATGGATTCAACGGTAGCGCAGTAACTCTGGAAGCCGTCTGGGACTCCATCTTCGGGTCGATGTCCGGGGAACTATCCGGTAACATAACGGACTATCAGATTGACGTTCGAGGCGGTGGTGATACTTCTAACTGTATCTTCATCGGGCGAATCCAGTCTGAGCGCGCTTACCACAAGTGCCTCCGCCTGAGCGCTATTCGTTCGGTGTTCAACACGATTCACGCAGAGCGTACCGCAGTCCTGACGATTGACGATGGTACAACCTTAGCCGATGGTGTCACTAAGTATACGACCTTCCATCTGAACCTAGGGAACAGTGTAGTGAATCAGCTCATCCATGACGCTATCACTGGCAATGCTCCTGATGGTCAACCGACAGTAGGCGTAGCGTCTGCACGTCTGGATATGGACTATTCGAACCTCAACGCAGCAGCTCTTGGTTCCTGCATCGTGAATACCAACAGTGGGCGAAACTCTCAGTTCACCTCCGTGGTGGCCCAGAAGTGGACCTTCAGCTCTACAGCAACCAACAACGTAATCTCGAACGTGCTCATCGCGGATAACCTTGCAGCAGCCAATACGACCACCTTCGTCGGTGGAACCATCGAGACTCTGACACCGCGATTCAATGCATCTGACTTACTGTTCGACAACGTGGCTATCAAGCAGCTGAACTTCGCGGCAGACATTAAGGGCAACATTCGGTTCCGTGCTTGTCGTTTCCCTGAGACGATGACCATCGGTACCACTCGTGCTCCTGAGGGTTATTCGGCAACGTCTACTCTAGGTGAGACCAACCTCCCGGTTACCTTTGAGAACTGTATCCTGCTGGGTACGTTCGTGGGTGCCTTCCAGTCTCGTGCTGTGTGGGAAGGTGGTTACATCAAAGCGGTAAACCTTGTGTCCCGCGCTGCCGTAGAGTTCTATGGTACAGCCATGGGTTCGTTCGATTGTACTGGTGACACTGCGTACGTTACCCGTCAGTGTAGGGCCTCTACGGCTTCAAACTGGGCCAGAACGACTCACGTTGCGTACCCTATTGGCACCATCACTGAGCGTCTTGGTGTGGACTCTGGGGCCGCTGGGTTGGCATTCAGAAACACTGATGGTACTGCCAATGGTTGGACGAAGATTTACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
8f01170fcca0c2e44338982647a6215d0c1f02ae404f3818b5d42c1bbd83bbc3
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7777
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A hybrid and poly-polish workflow for the complete and accurate assembly of phage genomes: a case study of ten przondoviruses Elek,C.K.A. and Adriaenssens,E.M. — — GenBank