Protein

View in Explore
Genbank accession
WDS62500.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,88
Protein sequence
MSLAQRLSALAQAIAQDVKNIILNYRLKTDLYEEKTTAVTVAPSTFDQVKQARWLKATWAPSSASNGGVVAADFVDMIFNGANGSVTGGGHYVGRFTYLQAIGGGALDQGFLEEHRVGVRNSTTVNTVIGRKWVIDKNSEASGTIGKLALEVFDDMRADVSYVQRFTREFLDPRMVTLHAGGVIQTGVIIGDETTTVSIADYWSGKSVYLNSASNRTLSVPASITEGFSLKLIQGSLGGKWSITAPGRTILSNTGATATVNAYDIVTLKVYPGGIVWLEFEANPATSYDTSKVVPIINGGTGATSAAAARSNLFDTRLQNFSSLSGGVDQLPYQTGANTWAQTPLTSVGRGMLGASTQANALSYIGGVPKSLTFNRAVSDPNTVPGECGFYGIGASPWANLPPGIDSLNPIGSMLYHHPYDVATAVQLFVPRTSNILYFRRKAASTWQPWVRVLSDAQLLGTVAQSGGSPIGSVLERGSNANGEYIRLADGTQICWFNASVTDQAVDSPYGSLFTGTRGWSFPATFAGSPTVSVGLFRWGTGAGWGTVGGIASTTSVTLRIFDISSRATGTATAISAIATGRWF
Physico‐chemical
properties
protein length:584 AA
molecular weight: 61693,59390 Da
isoelectric point:8,84850
aromaticity:0,09589
hydropathy:0,02192

Domains

Domains [InterPro]
DC_1166
STR
17–309
DC_1166 cd19958
DC_0857
STR
248–584
DC_0857
WDS62500.1
1 584
Architecture
STR
STR 17-584
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage UF_RH6
[NCBI] 		3028120 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas aeruginosa
[NCBI] 		287 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WDS62500.1 [NCBI]
Genbank nucleotide accession
OQ383211.1 [NCBI]
CDS location
range 43851 -> 45605
strand -
CDS
ATGAGCCTCGCACAACGTCTATCAGCACTAGCCCAGGCGATAGCTCAGGATGTAAAAAACATCATCCTTAACTATCGTTTGAAGACCGATCTGTACGAGGAGAAGACTACTGCGGTAACAGTGGCACCTTCTACTTTCGACCAAGTTAAGCAGGCTCGATGGCTAAAGGCGACCTGGGCGCCCTCTTCTGCCAGCAATGGAGGGGTAGTAGCTGCTGACTTCGTAGATATGATCTTCAACGGGGCTAACGGAAGCGTAACTGGGGGCGGCCACTACGTTGGCCGCTTTACCTATTTGCAAGCGATTGGCGGCGGCGCGCTCGATCAAGGCTTTCTCGAAGAGCATCGAGTAGGCGTCCGCAACAGCACTACGGTAAACACGGTCATAGGACGTAAGTGGGTTATCGATAAGAACTCGGAAGCTAGCGGTACTATAGGCAAGTTGGCGTTGGAGGTATTCGACGACATGCGCGCCGATGTCAGTTACGTGCAGCGATTCACTCGCGAGTTCTTAGACCCGCGTATGGTTACGTTACATGCTGGCGGGGTAATACAGACTGGAGTCATCATAGGGGACGAAACTACAACAGTCTCCATTGCGGACTATTGGTCAGGTAAGTCTGTCTACCTCAATAGTGCCAGTAATCGAACTCTATCGGTACCTGCCTCGATCACTGAAGGCTTCTCTTTGAAGCTGATCCAGGGATCGTTAGGTGGTAAATGGTCGATCACCGCTCCGGGCCGTACGATTCTGTCTAACACTGGAGCAACAGCCACTGTTAACGCCTACGATATAGTCACCTTGAAGGTCTACCCCGGAGGGATAGTGTGGCTAGAGTTCGAGGCTAATCCGGCCACCAGTTACGACACTTCCAAGGTCGTGCCGATTATTAATGGCGGTACTGGCGCTACGAGTGCCGCTGCCGCGCGGTCGAATCTATTCGATACCCGTTTGCAGAACTTCAGTTCGCTATCGGGTGGCGTTGACCAACTCCCATATCAGACTGGGGCCAATACCTGGGCGCAGACACCGCTGACGAGCGTAGGGCGCGGAATGCTCGGAGCGTCTACGCAGGCGAATGCTTTGAGCTACATCGGCGGCGTCCCCAAGAGCTTGACGTTCAACCGAGCGGTTTCTGACCCGAACACGGTACCGGGCGAGTGCGGGTTCTATGGTATCGGCGCGTCGCCCTGGGCGAACCTTCCGCCCGGCATCGATTCGCTGAACCCTATCGGATCGATGCTCTATCACCACCCTTACGACGTTGCGACTGCGGTTCAGCTATTCGTCCCGCGTACTTCAAACATACTGTATTTCCGTCGTAAGGCGGCCAGTACGTGGCAGCCTTGGGTCCGCGTGCTGTCCGATGCTCAGTTACTTGGAACAGTAGCCCAGTCTGGAGGCTCGCCGATCGGATCGGTTCTTGAGCGCGGCAGCAACGCGAATGGGGAATACATTAGGCTGGCAGACGGTACGCAGATTTGTTGGTTCAACGCCTCCGTTACTGACCAGGCAGTTGACTCTCCCTACGGTAGTCTGTTCACCGGAACTAGAGGCTGGTCTTTCCCTGCTACGTTCGCAGGAAGCCCGACTGTTAGCGTCGGTTTGTTTCGCTGGGGTACCGGCGCAGGCTGGGGTACCGTTGGTGGGATCGCGAGCACAACGAGTGTGACGTTGCGTATATTCGACATTTCTTCGCGCGCGACTGGCACGGCAACGGCGATTTCTGCAATCGCTACGGGGAGGTGGTTCTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
af6ae0f93951d2b13925493a695e19eff2cbb33e3c587bdf9f4212eea5bd5e66
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6834
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete Genome Sequencing of the Novel Pseudomonas aeruginosa phage UF_RH6 Hashemi Shahraki,A., Vahed,M. and Mirsaeidi,M. 2023-06-20 — GenBank