Protein

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Genbank accession
AXF38226.1 [GenBank]
Protein name
putative tail collar protein
RBP type
TF
Evidence RBPdetect
Probability 0,91
TF
Evidence RBPdetect2
Probability 0,81
Protein sequence
MSRVLDMWAGMTGTVLDFAGTAAPNGWLMCYGQAVSRANYPNLFAAIGTTFGAGDGATTFNLPDTRGRAAIGKDDMGGAAANRITPTGSGIAGNVPGSAGGNETHTLTAAQMPTHTHPNTVTDPGHTHANTVTNNPHSHANTLSDPGHTHGHNANSANSSSSTGGGGFALPATSGATISAATTGITINNASAASAVTISNASQTAGVTITNASQGSGGAHPNVQPGIVFNKIIKA
Physico‐chemical
properties
protein length:235 AA
molecular weight: 23170,06300 Da
isoelectric point:6,81996
aromaticity:0,04255
hydropathy:-0,18809

Domains

Domains [InterPro]
SSF88874
STR
6–235
SSF88874
DC_1155
STR
6–235
DC_1155
IPR037053
ATT
9–66
IPR037053
IPR011083
ATT
13–69
IPR011083
AXF38226.1
1 235
Architecture
ATT
STR
ATT 6-69 | STR 70-235
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Ralstonia phage phiRSP
[NCBI] 		2201420 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Ralstonia solanacearum
[NCBI] 		305 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Betaproteobacteria > Burkholderiales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AXF38226.1 [NCBI]
Genbank nucleotide accession
MH252365 [NCBI]
CDS location
range 33286 -> 33993
strand +
CDS
ATGAGCCGCGTACTCGATATGTGGGCCGGCATGACCGGCACCGTTCTGGATTTCGCTGGAACTGCGGCGCCGAATGGCTGGCTGATGTGTTACGGGCAAGCCGTCAGCCGCGCGAATTACCCCAACCTATTTGCTGCCATCGGGACGACGTTTGGCGCTGGCGATGGCGCCACCACGTTCAACCTGCCCGACACGCGCGGACGCGCCGCCATCGGCAAGGACGACATGGGCGGCGCTGCGGCGAACCGCATCACGCCAACAGGCTCGGGAATCGCTGGCAATGTGCCGGGGTCGGCGGGCGGCAACGAAACGCATACGCTGACGGCGGCGCAGATGCCGACGCACACGCACCCCAACACCGTCACCGATCCGGGCCACACGCACGCGAACACCGTCACCAACAACCCGCACTCGCATGCAAACACGCTGAGCGACCCAGGGCACACGCACGGGCACAATGCGAACTCCGCCAACAGCAGTTCGTCGACCGGCGGCGGCGGATTTGCGCTCCCGGCAACATCTGGCGCGACTATCAGCGCCGCGACAACGGGCATCACGATCAACAATGCATCCGCAGCGTCTGCGGTAACGATCAGTAACGCGTCGCAGACGGCTGGCGTGACCATCACGAACGCATCGCAAGGCTCCGGCGGCGCGCACCCCAACGTGCAGCCGGGTATCGTGTTCAACAAAATAATCAAGGCCTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
94a7391a88cdfd4225dd82f1866513fe2b597c2ed38725b285136870f9821219
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7059
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome of bacteriophage phiRSP, lytic for Ralstonia solanacearum Hernandez-Romano,J., Serrano-Plancarte,R., Hernandez-Silva,I.E. and Perez-de-la-Rosa,J.D. 2003-10 — GenBank