Protein

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Genbank accession
CCI89146.1 [GenBank]
Protein name
phage tail fibers
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
Protein sequence
MKLYHYYFDTKEFYKEENYKPLKGVGFPAHSTPKKPLDPKEGYAVVFDEREQEWVYIEDHRGKTVWTYDKQKIVIDTPGALQNVTTEEPGEFDIWTDDGWKEDEAYKRVVQRDKKIHELYKLFSVLSSLIDAEVANREEKRKFKELKKFFALLEKHEHLGGEFPKFPDLENKSIIKAIINIFK
Physico‐chemical
properties
protein length:183 AA
molecular weight: 21810,53510 Da
isoelectric point:6,11436
aromaticity:0,14208
hydropathy:-0,82404

Domains

Domains [InterPro]
DC_0168
STR
1–183
DC_0168
IPR060498
ATT
2–57
IPR060498
CCI89146.1
1 183
Architecture
ATT
STR
ATT 1-57 | STR 58-183
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Yersinia phage phiD1
[NCBI] 		1206560 Uroviricota > Caudoviricetes > Pantevenvirales > Tevenvirinae > Tequatrovirus
Host Yersinia pestis
[NCBI] 		632 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
CCI89146.1 [NCBI]
Genbank nucleotide accession
HE956711.1 [NCBI]
CDS location
range 157570 -> 158121
strand +
CDS
ATGAAACTCTATCATTATTATTTTGACACCAAAGAATTTTACAAAGAAGAAAATTATAAACCATTAAAAGGCGTAGGATTTCCGGCTCATTCAACACCAAAAAAACCTTTAGACCCTAAAGAAGGTTACGCTGTTGTATTTGACGAACGTGAACAAGAATGGGTATATATTGAAGACCATCGTGGAAAAACAGTATGGACTTATGATAAGCAAAAAATTGTTATTGACACTCCAGGTGCTCTTCAAAATGTTACTACAGAAGAACCTGGCGAATTTGACATTTGGACCGACGACGGGTGGAAGGAAGATGAAGCATATAAACGCGTAGTTCAACGTGATAAGAAAATTCATGAACTCTATAAATTATTCAGTGTTTTAAGTTCTCTTATTGACGCAGAGGTTGCTAATAGAGAAGAAAAACGAAAATTTAAAGAGCTCAAAAAATTCTTTGCCCTTTTAGAAAAACATGAACATCTTGGTGGCGAATTCCCTAAATTCCCTGACCTTGAAAACAAATCTATTATCAAAGCGATTATAAATATCTTTAAGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
9ad7345e29b3e0710d9a35af9964c070b0b945826c2a6b15cc9b9f4ac4bc543b
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,9110
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genomic characterization of five bacteriophages specific for Yersinia species Skurnik,M., Nawaz,A., Happonen,L., Butcher,S. and Mattinen,L. 2012 — GenBank