Protein

View in Explore
Genbank accession
AEC52969.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,87
TSP
Evidence RBPdetect2
Probability 0,60
Protein sequence
MTTTLNFKDNIDQFTWRFAAPAISAMAAGGCVAWDNRNSNRNTPYNYILNGAALFSAYSPLTNEFIPLPSPALAGTFGAGAACVMHPTQGPRGTLAAGATTTSVILTTALPAAVAANQLANRGDGEGFTIRIISPSSGKTEARQIIANTAGTTPTITLDSALTFTPAVGDLYEIRSGRVYLLSAGTLAAGIFRAYDIATNSYITLAQTNLPATIGGDSSMVALSEGHCPSDATDSNVGYFGNITSAAGNTSTTINASSGALPATLFANEYRNFQIRIINDPTNLTSVGQRRRITSHTSGATATFTVPTWTVTPSAAATFVIENDDDKILLFTNQTAVYNYNITANTWDTSTWAAAAAAGGAGIVAAHSHGILRDPSGNARHSFIYRIRGGNTNIIDVLDIAGGATGVWSSDIAYGNRGTLFNTGTCGANDPITNGGKYLNLNINGTQRHARFDMRNRVLEPLAFLHFGGAGATHVGGRLGMCYFFDGATKLGILSNNLCTSTSQVQLILQK
Physico‐chemical
properties
protein length:511 AA
molecular weight: 53469,14500 Da
isoelectric point:7,66959
aromaticity:0,08415
hydropathy:0,00450

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AEC52969.1
1 511
Domain Start End Length (AA) Confidence
N-terminal 1 101 101 0,0023
Central domain 102 300 200 0,0337
C-terminal 301 511 210 0,9964
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-101
Central
102-300
C-terminal
301-511

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage S-CRM01
[NCBI] 		1026955 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Synechococcus sp.
[NCBI] 		1131 cellular organisms > Bacteria > Bacillati > Cyanobacteriota/Melainabacteria group > Cyanobacteriota > Cyanophyceae

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AEC52969.1 [NCBI]
Genbank nucleotide accession
HQ615693 [NCBI]
CDS location
range 27309 -> 28844
strand +
CDS
ATGACTACTACTTTAAACTTCAAAGATAATATTGACCAGTTCACCTGGAGATTCGCAGCACCAGCTATTTCTGCGATGGCCGCTGGTGGTTGTGTGGCATGGGACAATAGAAATAGTAATAGAAATACACCATATAATTATATTTTGAATGGCGCAGCATTATTTTCTGCTTATTCTCCACTGACTAACGAATTCATTCCCCTACCATCACCGGCACTTGCAGGTACTTTTGGTGCTGGTGCGGCATGTGTTATGCACCCAACACAAGGCCCTAGAGGAACTTTAGCCGCTGGAGCTACCACAACTTCTGTCATACTGACAACTGCATTACCTGCTGCCGTTGCTGCCAATCAATTAGCAAATCGTGGTGATGGTGAAGGTTTCACAATCAGAATAATTAGTCCATCTTCCGGTAAGACTGAAGCTAGACAAATTATAGCGAATACCGCAGGAACAACTCCTACAATTACTCTTGATTCTGCATTAACTTTTACACCAGCAGTTGGTGATTTGTATGAAATTAGATCAGGTCGTGTATATCTACTCAGTGCCGGTACATTAGCTGCTGGTATTTTCAGAGCTTATGATATCGCAACAAACTCTTATATTACTCTCGCACAAACTAACCTACCTGCTACTATCGGTGGGGACTCTTCGATGGTTGCTTTAAGTGAAGGCCATTGCCCCTCTGATGCAACAGATAGTAACGTTGGATATTTTGGAAATATTACATCAGCAGCAGGTAATACATCTACTACAATAAATGCATCTTCTGGTGCCCTTCCTGCTACATTATTTGCCAATGAATACAGAAACTTTCAAATTAGAATTATCAACGATCCAACTAACCTAACCTCGGTTGGACAAAGGCGTAGAATTACCTCCCATACATCAGGAGCTACCGCTACATTTACCGTCCCTACCTGGACGGTAACTCCTAGTGCTGCGGCAACTTTTGTTATTGAAAACGACGACGATAAGATTTTACTATTTACTAACCAAACTGCTGTATATAACTATAACATTACTGCAAACACTTGGGATACATCTACTTGGGCTGCTGCGGCTGCGGCTGGTGGTGCTGGAATAGTAGCGGCGCATTCACATGGAATACTTAGAGATCCTTCTGGCAATGCCAGACATTCATTCATATACAGAATTCGTGGAGGTAACACTAACATTATCGACGTTCTAGATATTGCTGGTGGTGCTACTGGAGTGTGGTCTTCTGATATTGCATATGGAAATAGAGGTACTTTATTCAATACCGGAACATGCGGAGCTAATGACCCAATCACAAATGGTGGAAAGTATCTCAATCTAAACATAAACGGAACTCAGCGTCATGCAAGATTTGATATGAGAAATCGTGTGTTAGAACCATTGGCTTTCTTACATTTTGGTGGTGCTGGTGCTACACACGTAGGCGGAAGACTTGGTATGTGTTATTTCTTTGATGGAGCTACTAAATTAGGAATTCTTAGTAACAATCTTTGTACATCCACTTCACAAGTACAATTAATACTACAGAAGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
1ebe7a7c1642b9422514e008b70609b7796a8e21445457221e77934ecdcd5a8f
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6641
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50