Protein

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Genbank accession
UGL61139.1 [GenBank]
Protein name
tail tubular protein B
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MTKVTGSYESLIRGVSEQVAHQRYPGQHWVQDNMISDPVRGLVRRWGSVMKHEQATAALPTAATAQDVQDFRETSLYLGDVEYSFMHRRKQVIAGSTASGIVVVDKTNKRILPVSIGSGDAVAQSILQTGISSITSAGRFVLMASATKPVDYTEVNTWQTDRTGVCFITVGNYSRTYSVTASHVNGQTYTASYTTPSSYYPGTLDTSDIPASDTEYVKKVNDRVYAYQTAVNQWIGTSAAAIVPSAVVVQLVLALRNAGFPAGDVNSIENHMVFGNVLTGLSITDGANNSTVGAVFQEVEAVTDLSVRHRPDKVIRISPKITSGGSGTSYYVKARQISAADASGWPKVIWEEAAGIKVTPGFVCMLGCIQGGTFYLASSAAVLQSISGVSAPEWVPSSSGDYDSQQQLAMFGKTINYMRLFQDRLMVIAGSTVLLSKTGDYFNFFRASALQIANDDPIEMYALGSDDDVITDGALLDRDLLLFGNVWQYVISGREALSPQSPYISIQSSYTDSNHCSPVSAGNLVFYTQPRDHKLTVQQMQTGAYAGTVATFEVTQQLSKYLRGSPTALVATTSPSAVFVRTTGLTNGVYVFSYLDAPGQTERLFDSWSRWTWNESLGPTVGITGKDGALLTVTLRSGIGSNLYVLDEFTLAGTLSDTPYLDSQRPGQAPGGMAVGTPIAASLSAAMNGDAGDFFLIGRPFSDIAALEAEFPALVGSIVIGANYDSLVTVTNPYMRDNDGKPILDGRLTVGNFNVTTVDSAAMKVEVQDLQTLGMETTEVLNWVARPAGAWVLNKQQVMETATMAAGVYKETRNCKVTFRSRSWLPFGLSTMEWTGQFFTRRT
Physico‐chemical
properties
protein length:843 AA
molecular weight: 90963,32940 Da
isoelectric point:5,38870
aromaticity:0,09371
hydropathy:-0,05302

Domains

Domains [InterPro]
IPR058003
TTP
1–615
IPR058003 IPR058003
DC_0058
STR
1–843
DC_0058
UGL61139.1
1 843
Architecture
STR
STR 1-843
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
UGL61139.1
1 843
Domain Start End Length (AA) Confidence
N-terminal 1 193 193 0,8735
Central domain 194 392 200 0,2030
C-terminal 393 843 450 0,2541
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-193
Central
194-392
C-terminal
393-843

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage Eisa9
[NCBI] 		2900148 Uroviricota > Caudoviricetes > Autographivirales > Pollyceevirus > Pollyceevirus Eisa9
Host Pseudomonas syringae pv. tomato str. DC3000
[NCBI] 		223283 Pseudomonadota > Gammaproteobacteria > Pseudomonadales > Pseudomonadaceae > Pseudomonas > Pseudomonas syringae group genomosp. 3

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UGL61139.1 [NCBI]
Genbank nucleotide accession
OL581612 [NCBI]
CDS location
range 24130 -> 26661
strand +
CDS
ATGACCAAAGTTACGGGCAGCTATGAGTCCTTGATCCGTGGCGTGTCCGAACAGGTCGCGCATCAGCGGTATCCCGGCCAACACTGGGTGCAGGACAATATGATTTCGGACCCGGTGCGCGGCCTTGTGCGGCGCTGGGGTTCGGTCATGAAACACGAGCAGGCTACGGCAGCGCTGCCTACCGCTGCAACGGCGCAGGATGTTCAGGACTTCCGCGAGACCTCGCTGTACCTAGGCGACGTTGAGTACAGCTTCATGCACCGCCGCAAGCAGGTGATCGCAGGCAGCACCGCCAGCGGCATCGTCGTGGTGGACAAGACCAACAAGCGCATCTTGCCGGTGAGCATCGGCAGCGGCGACGCCGTGGCGCAGAGCATACTACAAACTGGCATCAGCAGCATCACGAGTGCTGGGCGGTTCGTACTGATGGCGTCAGCAACCAAGCCAGTGGACTACACCGAAGTCAACACTTGGCAAACTGACCGCACAGGCGTGTGCTTCATCACCGTGGGCAACTACTCCAGGACGTACAGTGTCACAGCGAGCCACGTAAACGGGCAGACGTACACAGCCTCGTACACCACGCCGTCAAGCTACTACCCCGGAACGCTGGACACAAGCGACATCCCGGCGAGTGACACGGAGTACGTCAAGAAGGTCAACGACCGGGTGTATGCGTACCAGACCGCTGTTAACCAGTGGATCGGTACGTCGGCGGCGGCAATCGTCCCGTCTGCCGTCGTGGTGCAGCTAGTTCTGGCGCTGCGCAATGCGGGCTTCCCAGCAGGCGATGTGAACAGCATCGAGAACCACATGGTATTCGGAAACGTGCTGACTGGACTGAGCATCACAGACGGTGCGAACAACAGCACAGTGGGCGCGGTGTTTCAGGAGGTCGAAGCAGTTACGGACCTCAGCGTCAGGCACAGGCCCGACAAGGTGATCCGCATCAGTCCCAAGATCACGAGCGGAGGCAGCGGCACTTCATACTACGTCAAGGCTCGTCAGATCAGCGCAGCGGACGCCAGCGGGTGGCCAAAGGTCATTTGGGAGGAAGCAGCGGGCATCAAGGTGACGCCGGGCTTCGTGTGCATGCTGGGCTGCATTCAGGGCGGAACGTTCTACCTCGCGAGCAGCGCAGCTGTCCTGCAAAGCATAAGCGGAGTGAGCGCACCTGAGTGGGTTCCGAGTTCGTCCGGTGACTACGACAGCCAGCAACAACTGGCGATGTTCGGCAAGACGATCAACTACATGCGGCTGTTCCAAGATCGACTGATGGTGATCGCAGGCTCCACTGTTCTGCTGTCCAAGACCGGTGACTACTTCAACTTCTTCCGGGCATCCGCGTTGCAGATTGCGAACGACGACCCGATTGAAATGTACGCACTGGGTTCTGACGATGACGTTATCACTGACGGCGCGTTGCTTGACCGGGACTTGCTCCTGTTCGGGAACGTGTGGCAGTACGTCATCAGTGGCCGGGAAGCGCTGTCACCGCAGTCGCCGTACATCAGCATTCAGTCCAGCTACACGGACAGTAACCACTGCTCTCCGGTGAGCGCGGGTAACTTGGTGTTCTACACTCAGCCCCGAGACCACAAGCTGACAGTGCAGCAGATGCAGACCGGCGCGTACGCTGGCACCGTTGCGACCTTCGAGGTTACGCAGCAGCTCAGCAAGTACCTGCGCGGTAGCCCGACTGCGCTGGTGGCAACGACCTCTCCATCGGCGGTGTTCGTCCGCACGACTGGGCTCACCAACGGCGTGTACGTGTTCAGCTACTTGGACGCACCGGGCCAAACGGAACGGCTGTTCGATAGCTGGAGCCGGTGGACTTGGAACGAATCGCTCGGCCCAACCGTCGGGATCACCGGCAAGGACGGCGCGTTGCTGACAGTGACCCTGCGCAGCGGCATCGGTTCCAACCTGTACGTGCTGGACGAGTTCACGCTTGCAGGTACGCTGAGCGACACGCCGTATCTGGACAGCCAGCGTCCCGGACAGGCGCCGGGCGGGATGGCCGTGGGCACACCGATTGCTGCCAGCCTAAGCGCTGCAATGAACGGTGACGCGGGAGACTTCTTCCTGATCGGTCGCCCGTTCTCCGACATCGCTGCGCTGGAGGCAGAGTTCCCGGCCCTTGTCGGTTCCATCGTGATCGGCGCGAACTACGACAGCCTCGTCACTGTCACCAACCCGTACATGCGGGACAACGACGGTAAGCCGATTCTGGACGGACGGTTGACTGTGGGCAACTTCAACGTGACCACTGTTGACAGCGCGGCCATGAAGGTTGAGGTGCAGGACTTGCAGACGCTCGGCATGGAAACCACCGAGGTTCTTAACTGGGTGGCCCGGCCAGCGGGCGCGTGGGTACTCAACAAGCAGCAGGTCATGGAGACTGCAACGATGGCTGCGGGCGTGTACAAAGAGACACGTAACTGTAAGGTAACGTTCCGCTCTCGCTCGTGGCTTCCATTTGGATTGTCCACCATGGAATGGACTGGACAGTTCTTCACTCGGAGGACTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
0eda732bd896033e7029041defaec844e5f7729860bbe0d653ecfabecdfed61f
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2910
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of Pseudomonas phage Eisa9 Korniienko,N., Kharina,A., Zrelovs,N., Jindrichova,B., Moravec,T., Budzanivska,I., Burketova,L. and Kalachova,T. 2020-09-06 — GenBank