Protein

View in Explore
Genbank accession
QNI20827.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MASPVKKQTFESLPFYTDITNVKDGMLLFIKDGKAYQYPLEMLGVQKVAQGVVIRDAAYELEAAAATDWYLGLSQPETDLTIKSDGVLGAFRYTLNLTILQGTGANKINWPSNVKFPHDAYPVLSYQKGKSDMITLTTIDGGYTWKGGVSGTGYTEWVETP
Physico‐chemical
properties
protein length:161 AA
molecular weight: 17714,93140 Da
isoelectric point:5,09933
aromaticity:0,11801
hydropathy:-0,19565

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage JN03
[NCBI] 		2759204 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella sp.
[NCBI] 		599 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QNI20827.1 [NCBI]
Genbank nucleotide accession
MT799840.1 [NCBI]
CDS location
range 108274 -> 108759
strand +
CDS
ATGGCCAGCCCAGTTAAAAAGCAAACATTTGAGAGCTTACCATTTTATACCGATATCACCAACGTGAAAGATGGGATGTTGTTGTTTATCAAAGATGGGAAAGCGTATCAGTACCCGCTCGAGATGTTGGGTGTCCAGAAGGTTGCTCAGGGTGTCGTTATTCGTGATGCGGCGTATGAGTTGGAAGCGGCAGCAGCCACTGATTGGTACCTAGGACTGTCGCAACCGGAAACCGATCTCACTATTAAAAGTGATGGTGTATTGGGGGCATTTCGGTACACGCTCAACCTGACTATTCTTCAGGGAACGGGAGCCAACAAAATTAACTGGCCTTCCAACGTGAAGTTCCCCCATGATGCATACCCGGTGCTGTCGTACCAGAAAGGGAAATCGGACATGATTACCCTGACTACAATCGACGGCGGTTACACCTGGAAAGGTGGCGTTAGTGGAACAGGATATACAGAATGGGTAGAAACTCCTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
08c29386ca52881ec7be879ae8df1900459cd47d9647aa1bffe5942e4f865fa8
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8131
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Bacteriostatic effect of Salmonella bacteriophage on food surface Bi,Y., Wu,G., Shu,M. and Zhong,C. 2022-12 — GenBank