Protein

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Genbank accession
QHZ59796.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 0,98
TSP
Evidence RBPdetect
Probability 0,89
Protein sequence
MGVDRVAILFRDTFTESSNTNLIDHTPEQGGPWVYEAGVPDNAAIVRSEDELRLNGSIVDGFYVYDGTANAGGYIATTPASSLVTPEKYCCIRLVDSNNFFGIEFRGTGSSGVGFVKSVGGVITDLYSETPEAGAVYYLDDNGNSLVFKKDNGATTTLYTENDSEFSTETKKGFVSLGTGNSNPSTYYESGTLEAPTGVTINSLSDYSAKPRDANGDATFTVSGGCPDGTSAIEYSFDEITWLTLDASPSGGAYSGTVVVNGQTDIFVRSADDNALTASVVGITSAMPIVLWGQSNCDGRGINNQAVASGSIVPLMYKSGAVTQMADPTGITVDSAGSLWPLVVKYFIDQGIPVVMANVAQGGKTVAEFEPSTSLYSRISDFAANFGSPELAISVIGEADSGGTTKADFKTRYLNIAQTMNTDYGTETYAVKFPVGTATNTTTQTEIREAYDELIDENAFIKFGGDLSVIDIDSGIGHDSLHLKTDSHLSEGDVIIRSALAGIVPDVTKPVITLLGTPSVVITNGSNYTDAGATASDNIDGDITSNIVTVNPVNTNVSATYTVTYNVTDSAGNAADEVTRTVTVQDAASDNQPPTSNAGADQTNIAAGATVTLNGTGSTDSDGTIVSYAWTQTAGDIVTLISATSASPTFTAPTTANAQTLTFELTVTDDGGLTSAPDSVDVQVNALTLPSVSISAVSQVNTGQSFSPTVTVSGYDNLLWECTSGQSPSFSSTTAEAPFITLNEGGVHTFRLTATNISGSVSDTFNITGMVQVVESALNLSWEGLPDGTYTVLFIDRDNDSVLSRSVTSSNEAAAVTLPLPVGTKVDYYWYNETSGDAVLNTGATE
Physico‐chemical
properties
protein length:846 AA
molecular weight: 88147,34310 Da
isoelectric point:4,05003
aromaticity:0,07920
hydropathy:-0,07470

Domains

Domains [InterPro]
IPR036514
STR
289–504
IPR036514 IPR013783 IPR022409 IPR022409
IPR036514
STR
289–505
IPR036514 IPR013783 IPR035986
SSF52266
STR
290–500
SSF52266 IPR032179 PF22352
IPR029865
Unmapped
559–685
IPR029865
IPR013783
STR
600–685
IPR013783
IPR013783
STR
600–680
IPR013783
QHZ59796.1
1 846
Architecture
STR
STR
ENZ
STR 289-588 | STR 590-687 | ENZ 689-772 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QHZ59796.1
1 846
Domain Start End Length (AA) Confidence
N-terminal 1 29 29 0,2861
Central domain 30 280 252 0,4982
C-terminal 281 846 565 0,0948
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-29
Central
30-280
C-terminal
281-846

Taxonomy

  Name Taxonomy ID Lineage
Phage Alteromonas phage vB_AmeM_PT11-V22
[NCBI] 		2704031 Uroviricota > Caudoviricetes > Myoalterovirus >
Host Alteromonas sp.
[NCBI] 		232 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Alteromonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QHZ59796.1 [NCBI]
Genbank nucleotide accession
MN877442.1 [NCBI]
CDS location
range 89161 -> 91701
strand +
CDS
ATGGGGGTGGATAGAGTGGCTATTCTTTTTAGAGACACATTTACTGAATCGTCTAACACAAACCTAATAGACCATACGCCAGAGCAGGGTGGGCCGTGGGTTTATGAAGCGGGCGTACCAGATAACGCAGCGATAGTCAGAAGCGAAGACGAGCTTAGGCTGAACGGCTCGATAGTTGATGGGTTTTATGTGTACGACGGAACTGCAAATGCTGGCGGGTATATAGCCACCACTCCTGCAAGCTCTCTTGTAACACCAGAAAAATATTGCTGTATACGACTTGTCGATAGTAATAATTTTTTTGGAATAGAGTTTAGAGGTACAGGGTCGAGCGGCGTTGGCTTTGTTAAATCTGTCGGCGGGGTGATAACTGACCTTTACTCAGAAACACCAGAGGCAGGTGCTGTCTATTACTTAGATGATAATGGTAATAGCTTAGTATTTAAAAAAGACAACGGCGCAACAACAACACTTTATACAGAAAACGATTCTGAGTTTTCGACAGAAACTAAAAAGGGTTTTGTTAGTTTGGGGACTGGCAATAGTAACCCGTCAACATACTACGAATCGGGAACGCTAGAAGCGCCCACAGGTGTAACGATTAACTCCCTTTCTGATTACAGCGCAAAGCCTCGCGACGCTAATGGGGATGCCACGTTTACAGTTTCGGGTGGGTGTCCAGACGGAACAAGCGCGATAGAATACAGTTTTGACGAAATAACATGGTTGACACTGGACGCATCGCCGAGCGGGGGTGCTTACAGCGGCACTGTGGTTGTTAATGGGCAGACTGACATTTTTGTGCGCTCGGCAGATGACAACGCATTAACCGCGAGCGTAGTTGGCATTACTTCAGCTATGCCGATTGTTTTGTGGGGTCAATCGAATTGTGATGGACGTGGCATAAACAATCAAGCAGTTGCATCAGGCTCAATCGTACCACTGATGTACAAGAGCGGTGCTGTTACTCAAATGGCAGACCCCACAGGGATTACAGTTGATTCTGCGGGGAGTTTATGGCCTTTGGTTGTTAAATATTTTATTGACCAAGGCATTCCAGTTGTAATGGCTAACGTGGCGCAGGGTGGCAAGACCGTTGCAGAATTCGAGCCGTCAACCTCTCTCTACTCAAGAATATCTGACTTCGCCGCTAACTTCGGCTCGCCAGAATTGGCGATAAGTGTAATAGGTGAAGCCGACAGTGGAGGCACTACAAAAGCCGACTTTAAGACGCGATATTTGAATATCGCCCAAACCATGAACACGGATTACGGCACAGAGACCTATGCCGTTAAGTTTCCTGTAGGAACAGCGACCAACACGACAACGCAAACAGAAATACGTGAAGCCTACGACGAGTTGATAGATGAAAATGCATTTATTAAGTTCGGCGGCGACTTGTCTGTCATTGATATTGACAGTGGTATAGGCCACGACAGCTTACACTTAAAAACAGACTCACATTTATCTGAAGGGGATGTGATAATAAGGTCTGCGTTAGCTGGTATAGTGCCCGATGTGACCAAGCCAGTTATCACACTACTAGGTACTCCATCGGTAGTGATAACAAACGGTAGTAACTATACGGACGCAGGTGCAACGGCGAGCGATAACATTGACGGAGATATTACCTCCAACATTGTCACTGTAAACCCTGTTAATACGAACGTATCTGCAACCTACACGGTCACATACAACGTTACAGATTCGGCAGGTAACGCAGCAGACGAGGTAACTAGAACGGTTACAGTTCAAGACGCTGCGTCAGACAACCAACCACCAACCTCAAACGCAGGTGCAGACCAAACCAACATCGCAGCAGGCGCAACAGTAACGCTAAACGGCACAGGTTCAACAGATTCAGATGGTACAATTGTTAGTTACGCGTGGACACAGACAGCGGGTGACATAGTAACGTTAATTAGTGCAACATCGGCTAGCCCTACGTTCACAGCGCCAACGACAGCTAACGCACAGACGCTAACATTTGAATTAACTGTTACTGATGATGGTGGATTAACTAGTGCACCTGACTCAGTTGATGTGCAGGTAAATGCCCTTACATTGCCAAGTGTGTCTATAAGTGCAGTATCTCAGGTCAACACAGGTCAGAGTTTTTCTCCTACAGTGACAGTTTCTGGGTATGACAATCTCTTGTGGGAATGCACTAGTGGACAATCCCCTAGTTTCTCTTCTACTACAGCAGAAGCACCTTTCATTACTCTTAATGAAGGGGGCGTACACACTTTCAGACTTACTGCAACTAATATCTCTGGTAGTGTTAGTGACACCTTCAACATCACAGGAATGGTTCAAGTGGTTGAGTCTGCCTTAAACCTCTCATGGGAAGGTCTTCCTGACGGAACATACACAGTGTTGTTTATAGACAGAGATAACGATAGTGTACTTTCAAGAAGTGTAACCTCCTCTAATGAAGCAGCTGCAGTGACTTTACCTTTACCAGTTGGAACTAAAGTAGATTACTATTGGTATAATGAGACCTCTGGAGATGCTGTGTTGAATACAGGAGCCACTGAGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
9c7fb7fb3688da1d0d862c4e321f3c14d53da95269489efecc31757c11ec2d47
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8369
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Alteromonas phage V22 represents a new genus of marine bacteriophages that requires a novel tail fiber chaperone for host recognition Gonzalez-Serrano,R., Dunne,M., Rosselli,R., Martin-Cuadrado,A.-B., Grosboillot,V., Zinsli,L., Roda-Garcia,J.J., Loessner,M.J. and Rodriguez-Valera,F. 2020-06-30 — GenBank