Protein

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Genbank accession
XYM57229.1 [GenBank]
Protein name
virion structural protein
RBP type
TF
Evidence RBPdetect
Probability 0,71
Protein sequence
MARKSIKSNYYLFDASARQVVIPGGIQREQLTLITNVTDNKIIYNFSDPELTATAYSIETDIRNVTTTRVTLAYDTTSMADTDKLQIVYDDFEETVKPAETYMDSVNKQRVSNPQSQIDTDFEYGTQGTKWEALAMINNNPFAYKSETALVVTQIEAFTNNKLIRVTVDTNQTPLPAAGSAVFVQDTTFPGANGVFIIDAAGSGSLNSNQFSYTASFAWTQGNSSIQISGRTDVYTGSHYTGSDIGGSLTLSAPGDGQVRVVCTNSWSGSR
Physico‐chemical
properties
protein length:271 AA
molecular weight: 29528,22520 Da
isoelectric point:4,61086
aromaticity:0,09594
hydropathy:-0,31624

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage Sf-CH11
[NCBI] 		3413211 Viruses >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XYM57229.1 [NCBI]
Genbank nucleotide accession
PV340848 [NCBI]
CDS location
range 176468 -> 177283
strand -
CDS
ATGGCGAGAAAATCCATTAAGAGTAACTATTATCTTTTTGATGCTTCCGCAAGACAGGTGGTAATTCCTGGTGGTATCCAGAGGGAGCAGTTGACTCTTATTACTAACGTAACAGATAATAAGATCATCTATAATTTCTCGGACCCAGAACTTACTGCCACTGCGTATTCGATTGAAACTGATATCCGTAACGTAACTACCACTAGAGTTACTCTGGCATATGACACCACGTCTATGGCAGACACTGATAAACTTCAGATTGTCTACGATGATTTTGAAGAGACAGTAAAACCAGCAGAGACCTACATGGACTCTGTTAACAAGCAGAGAGTTTCTAATCCTCAGTCACAAATTGATACCGACTTTGAGTATGGCACTCAGGGTACGAAGTGGGAAGCGTTGGCAATGATCAACAACAACCCATTCGCATATAAATCCGAGACAGCTCTAGTAGTTACTCAGATTGAAGCATTTACTAATAACAAACTTATTAGAGTTACTGTAGACACCAACCAAACTCCTCTACCTGCTGCTGGTTCTGCTGTTTTTGTTCAGGATACCACATTCCCTGGTGCTAATGGCGTATTCATCATTGATGCTGCTGGATCTGGTTCTCTAAATTCTAACCAATTTAGTTACACTGCATCATTTGCATGGACTCAAGGCAACAGCTCTATTCAAATCTCTGGCAGAACTGATGTCTACACTGGATCACATTACACAGGATCTGATATCGGCGGATCACTGACCCTATCTGCTCCTGGTGATGGACAGGTTAGAGTTGTATGTACTAATTCATGGTCTGGAAGTAGGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
09aa55c1fcb6421efcdafb9685572fa770d905230fa9c2d6d367ec0b22b8315a
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8470
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50