Protein

View in Explore
Genbank accession
UYD57870.1 [GenBank]
Protein name
long-tail fiber proximal subunit
RBP type
TSP
Evidence RBPdetect
Probability 0,81
TF
Evidence RBPdetect2
Probability 0,95
Protein sequence
MLGQAFRATSGLDAAGEKLINVAMADKTILSDGVSVGFFHKYNTIYEYDSTRGYDAKHAVIYERRIYYAKANIASPAGAFDVTKWTGLRVDPTWQFINSTGPALQLSSGQYITADNRFNNLVFNLPTSPVDGDTLVIKDVGGQPGVNDLEFVSIGTAVIEFKAASVGARFRATVPFCQYMFVYKAAGNRWQVDVAATAMNSYFVEPSIQGFQLQSGMVTWRRTAAGTIRLVLPKHARHGDVITTHDIDGMNPINHSTLEIYPGSGHNINETGVTKIESRTSGYGSFVFDFPSLTWKVWDGDQRTRIRVTKTDTALLPFEHILVTGNSNLPSQTTVLTLPEEVAIGDRVQITMDYLRKGQTCTIRVSPGSNELIVGSKAQMQFQRRSEYPMTNGWELVSSISISADTDYVPYVELMYAQLDPSLVGVTSSQYGWMIGNVQPKVERVDATRRDRLGVAALADQAEVNKNHEDNPNDETIVTPKTLANKTATETRRGIARLATTAEVNQLSTSTYLDDIIVTPKKLNERTATETRRGLAEIATQAEANGSTDDITIVTPKKLHNRIASETLTGILAVVSKNGTAGTTRSAAGTGVYNKADHSKAVTPLTLDEFKATETAKGIGYIATQAEVDGGSSDPLGPLLVTAERLGARRATESNHGLIEIATQTETNAGTDDTRAITPKKLNDRTSTETLAGIARIANTSEIDTATNDLTIVTPLKLKNRFNDTARISVNATDGLTQSGTIWSTVSVGISLATEAQRGTLRVSTQLEANGSSSDNTIVTPKKLDGRKATRTLDGIIRVATTAEVRTGTATNLAVSPEDFKYIAQTEPTWSGNETRRGFVKAATVESTFVGNNNVGSTQAYTSYANDGLAVSPHGLNYALQNYLPLNATAQNALSLGGVVSSEWVRRTVDQTITGAMNFTAPMTTKAVTGTTSTFNLAFIESNRSDALTIGSAVNTGVTGITFIGGTTGSNRWKLYAGNDSSIDEVGGGGIGFAPGVAGPVFHVTTAGDSWTQRNIVSRAGSLSLESASAGISMGGSHFASVSTTDNRMNIGTGSRNVVINSAGDNAKIGIYDIVHTGNQASKLNPVYLRRDGGNTQTGKVLAEMAGDVKYSTFRNDNRYISSRGNDFVFGNTDTTNGRVCLDTNQNPIVKIGNFEYEIYHKGNKPTAQDVGAIDVTGSSSNNITIRDWIKIGNVKIVANNLTKTVEFIWEE
Physico‐chemical
properties
protein length:1212 AA
molecular weight: 130214,75450 Da
isoelectric point:6,34024
aromaticity:0,07013
hydropathy:-0,28317

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
UYD57870.1
1 1212
Domain Start End Length (AA) Confidence
N-terminal 1 577 577 0,7149
Central domain 578 814 238 0,0744
C-terminal 815 1212 397 0,7454
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-577
Central
578-814
C-terminal
815-1212

Taxonomy

  Name Taxonomy ID Lineage
Phage Aeromonas phage avDM3
[NCBI] 		3101596 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Aeromonas hydrophila
[NCBI] 		644 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Aeromonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UYD57870.1 [NCBI]
Genbank nucleotide accession
OP380595 [NCBI]
CDS location
range 152642 -> 156280
strand +
CDS
ATGTTAGGACAAGCCTTTCGCGCCACAAGCGGCCTTGATGCAGCTGGCGAAAAACTGATCAACGTTGCAATGGCCGATAAGACAATTTTGTCCGATGGCGTTAGCGTTGGATTTTTCCACAAATATAACACAATTTACGAATATGACAGCACACGTGGTTATGATGCAAAACATGCTGTAATTTACGAGCGTCGAATTTATTATGCGAAAGCAAATATTGCTTCCCCGGCAGGGGCTTTCGACGTCACCAAATGGACTGGCCTCCGTGTTGACCCAACATGGCAGTTCATTAACTCGACTGGACCCGCACTTCAGCTGAGTTCTGGTCAATATATCACTGCTGACAATAGATTCAACAATCTGGTTTTCAACTTGCCAACATCACCAGTCGATGGCGATACTTTGGTAATAAAGGACGTAGGCGGTCAGCCAGGTGTTAACGATCTGGAATTTGTATCTATAGGAACAGCTGTCATTGAATTCAAGGCAGCCAGTGTCGGCGCTCGCTTCCGTGCAACTGTCCCATTCTGCCAATATATGTTCGTCTATAAAGCAGCTGGAAACAGATGGCAAGTAGATGTAGCAGCTACAGCAATGAACAGTTATTTTGTTGAGCCATCGATTCAAGGATTCCAGTTGCAGTCAGGGATGGTTACCTGGAGACGTACTGCTGCAGGAACAATTCGTCTTGTTCTGCCAAAACATGCTAGGCATGGCGATGTAATTACAACCCATGATATTGATGGGATGAACCCGATTAACCACTCGACTCTTGAGATTTACCCAGGTTCAGGTCACAATATTAATGAAACCGGTGTTACAAAAATCGAATCACGCACATCTGGTTACGGATCGTTCGTATTCGATTTTCCTTCTTTGACTTGGAAAGTATGGGATGGAGACCAAAGGACACGTATTCGTGTTACCAAAACCGACACAGCGCTGCTACCGTTTGAACACATTCTGGTGACTGGCAACAGTAATTTGCCAAGTCAGACCACAGTGCTGACTCTTCCAGAGGAAGTAGCCATAGGTGACCGTGTTCAAATCACTATGGATTATCTGAGAAAAGGTCAAACTTGTACGATCAGAGTAAGTCCAGGTTCAAACGAGCTGATTGTTGGGTCGAAAGCTCAAATGCAGTTCCAGCGTCGTTCGGAATACCCGATGACAAATGGGTGGGAATTGGTTTCATCTATTTCTATAAGTGCTGACACAGATTACGTTCCATATGTCGAACTAATGTACGCACAGTTAGACCCGTCCCTGGTGGGTGTTACTTCTTCGCAATACGGATGGATGATCGGAAATGTTCAACCAAAAGTTGAACGTGTTGATGCAACTCGTCGTGATCGTCTGGGTGTGGCTGCTCTCGCGGATCAAGCAGAAGTAAACAAAAATCACGAAGATAACCCGAATGACGAAACTATTGTCACTCCAAAAACATTAGCTAATAAGACTGCTACTGAAACTCGTCGTGGCATTGCCCGTTTGGCAACAACCGCTGAAGTCAATCAGTTAAGCACTTCAACTTATTTGGATGACATTATCGTCACTCCGAAAAAGTTAAATGAAAGAACTGCTACCGAAACTCGGCGTGGTTTAGCGGAGATTGCAACTCAAGCAGAAGCAAACGGCTCGACTGACGACATAACAATTGTGACTCCCAAAAAGTTGCATAATCGTATTGCGTCAGAAACTCTGACTGGTATCTTAGCCGTGGTTTCTAAAAATGGAACAGCTGGTACAACTCGCTCGGCTGCTGGGACTGGCGTGTATAACAAAGCCGATCATTCGAAGGCTGTCACACCGTTAACCCTGGATGAATTCAAGGCTACCGAAACAGCTAAGGGTATAGGTTATATTGCCACACAGGCGGAAGTCGACGGGGGATCATCTGATCCACTTGGTCCATTGCTTGTGACAGCCGAAAGATTGGGTGCTCGCCGAGCGACAGAATCAAATCACGGTTTGATTGAGATTGCAACCCAGACCGAAACAAATGCCGGAACTGATGATACACGTGCTATTACTCCCAAAAAGTTGAATGATCGCACTTCAACAGAAACTCTCGCTGGTATTGCCCGTATTGCCAATACATCTGAAATAGATACTGCGACAAACGATTTAACTATCGTCACTCCATTGAAATTGAAGAATCGTTTCAACGATACAGCAAGAATTTCGGTAAACGCTACCGATGGTTTGACCCAATCTGGAACCATTTGGAGCACTGTTTCTGTCGGTATAAGTCTTGCAACCGAAGCTCAACGTGGGACATTACGTGTTTCGACTCAACTTGAGGCGAATGGATCTAGTTCAGACAATACTATCGTAACTCCAAAGAAACTCGATGGAAGAAAAGCGACAAGAACCCTGGACGGTATTATCCGGGTTGCGACAACCGCTGAAGTTAGAACTGGAACAGCTACTAATTTAGCCGTTAGCCCAGAAGACTTCAAGTATATAGCACAAACTGAACCGACATGGTCAGGAAATGAAACACGTCGTGGGTTTGTCAAAGCAGCAACAGTAGAGTCGACTTTCGTTGGAAACAATAATGTTGGATCCACTCAAGCATACACAAGCTACGCAAATGATGGTTTGGCTGTTAGCCCTCATGGATTGAACTATGCGCTGCAAAACTACTTGCCGCTGAACGCCACAGCACAGAACGCGTTGTCTCTGGGTGGTGTAGTTTCCAGTGAGTGGGTTCGCAGAACAGTAGATCAAACTATAACTGGCGCAATGAATTTCACCGCCCCAATGACCACTAAGGCTGTAACTGGTACAACATCGACATTTAATTTAGCCTTTATTGAGTCAAATCGATCAGATGCGTTGACTATCGGCTCGGCTGTTAATACAGGGGTCACTGGTATTACCTTTATCGGTGGGACAACGGGTTCCAACAGGTGGAAACTTTACGCTGGAAATGACAGTTCCATTGACGAGGTCGGCGGTGGTGGTATTGGATTTGCGCCAGGCGTGGCTGGACCAGTATTCCATGTTACAACCGCTGGTGATTCATGGACACAGCGCAATATTGTATCTCGCGCTGGCAGTCTTAGCCTTGAGTCAGCTTCCGCAGGAATTTCAATGGGCGGGTCTCATTTTGCGTCGGTTAGCACAACTGACAACAGAATGAACATTGGTACAGGATCGCGCAACGTTGTGATAAATTCGGCCGGTGACAACGCCAAAATTGGAATTTATGACATCGTTCACACTGGAAACCAGGCTTCTAAATTGAATCCGGTATATCTGCGTCGAGATGGTGGAAACACTCAAACAGGCAAAGTCTTGGCCGAAATGGCTGGTGATGTAAAATACAGCACCTTCCGAAACGATAACCGTTATATTTCGTCACGCGGAAATGATTTCGTTTTCGGAAATACCGATACAACGAATGGCCGTGTGTGTCTCGATACGAATCAGAATCCAATCGTAAAGATCGGAAACTTTGAGTACGAGATTTATCACAAGGGTAACAAACCTACCGCTCAAGACGTAGGTGCAATTGATGTTACAGGTTCATCTTCCAATAATATAACGATTAGAGATTGGATCAAAATCGGTAATGTGAAAATCGTTGCCAACAACTTGACCAAGACAGTTGAGTTTATCTGGGAAGAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
fb88ed873bf58a7d381337c1dbc53fc0e17a7245283cf6564a6ec0047684f4b6
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5452
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
On Diversity and Genetic Richness: Insights on Aeromonad Phage Diversity through Physicochemical and Molecular Analysis Papa,D.M., Rousseau,G., Tremblay,D., Labrie,S., Gutierrez,T.A., Ramos,J.D. and Moineau,S. 2024-03-24 — GenBank