Protein

View in Explore
UniProt accession
W6PNE5 [UniProt]
Protein name
Predicted tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,80
Protein sequence
MAESTIIQYPVGSQQYAIPFDYLARKFVVVSFINSNNPSDNIELRQGVDFQFLDQRNIELTIEATTQDIVQIRRFTDVELLVDFRDGSVLTANDLTTSELQAIHIAEEGRDQTYGLAQQFAEEAKSAAEASQEALDEVMAQAKWGYTAVGSFELGVPTPGVTLRNQAVSWGLGDDTAYYIWEGVLPKEVPEDSSPELTGGIAPGAWRYVGYNINVIKQQLAGDIPFKYESSPRANQGRILNHSPQTIRIATWNVWGGGSGHLYGNLGSPERYRDLQERILHRQLDFCGLQEFYTNYRYPVSMLQIFPLNTAFHGVVEPYNHVTGVVARNFNYGNVTLCVDSVISNTNHVYANAGNTDDKESRGYVRTVANIRGTRVAFYVTHMSYMTNRLIPMFTELVNAVKLDPETKIVVMGDFNTDREDLFKLFTDEGFVSHNNKEFNTNNTGGTWYIDNILTKGFGAVVEKGTQDSAAKLADHKMFFVEMEV
Physico‐chemical
properties
protein length:485 AA
molecular weight: 54400,14000 Da
isoelectric point:4,90489
aromaticity:0,11134
hydropathy:-0,30763

Domains

Domains [InterPro]
DC_0369
STR
1–476
DC_0369
IPR005604
ATT
13–113
IPR005604 Coil G3DSA:2.10.10.80 IPR036691
IPR040775
RBD
160–210
IPR040775 IPR036691
IPR005135
STR
250–463
IPR005135
W6PNE5
1 485
Architecture
STR
ATT
STR
ATT
STR
STR 1-12 | ATT 13-113 | STR 114-145 | ATT 146-222 | STR 223-485
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
W6PNE5
1 485
Domain Start End Length (AA) Confidence
N-terminal 1 250 250 0,9684
Central domain 251 449 200 0,4680
C-terminal 450 485 35 0,2221
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-250
Central
251-449
C-terminal
450-485

Taxonomy

  Name Taxonomy ID Lineage
Phage Citrobacter phage CR8
[NCBI] 		1455076 Uroviricota > Caudoviricetes > Autographivirales > Studiervirinae > Caroctavirus
Host Citrobacter rodentium
[NCBI] 		67825 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
CDM21632.1 [NCBI]
Genbank nucleotide accession
HG818824 [NCBI]
CDS location
range 33271 -> 34728
strand +
CDS
ATGGCAGAAAGTACAATCATTCAGTACCCCGTTGGTTCCCAACAGTACGCCATTCCGTTTGACTATCTGGCCCGTAAGTTTGTTGTTGTTAGCTTTATCAATAGCAACAATCCGTCAGATAACATCGAGTTGCGCCAAGGTGTTGACTTTCAGTTCCTCGACCAGAGAAACATCGAGTTAACCATTGAAGCCACAACTCAGGACATCGTGCAGATTCGGCGCTTCACAGACGTTGAGCTTCTGGTTGACTTCCGTGATGGCTCGGTCCTAACCGCCAACGACCTCACCACATCCGAGCTTCAGGCTATCCACATCGCTGAGGAAGGACGAGACCAGACTTATGGTCTGGCCCAACAGTTTGCTGAGGAGGCGAAGAGTGCAGCAGAGGCTTCACAGGAGGCCCTTGACGAGGTTATGGCGCAGGCTAAGTGGGGATACACAGCAGTTGGTAGCTTTGAACTCGGTGTCCCGACTCCGGGTGTGACCCTGCGTAATCAGGCTGTATCTTGGGGACTGGGGGATGACACCGCGTATTACATCTGGGAAGGTGTGTTGCCCAAGGAAGTGCCAGAGGATTCAAGCCCGGAGCTTACTGGTGGCATTGCGCCCGGGGCGTGGCGCTACGTCGGCTATAACATCAACGTCATTAAGCAACAACTCGCTGGTGACATCCCGTTCAAGTATGAGTCCAGCCCACGAGCCAATCAGGGCCGAATCCTCAACCACAGTCCACAGACTATTCGAATTGCGACATGGAACGTGTGGGGGGGTGGGTCTGGGCACCTATATGGGAACCTCGGGTCCCCTGAGCGATACCGGGACCTACAGGAGCGAATCCTCCACCGCCAGCTCGACTTCTGTGGACTTCAGGAGTTCTACACGAACTACCGATACCCGGTGTCGATGCTTCAGATTTTCCCACTGAATACAGCTTTCCACGGTGTAGTGGAGCCATATAACCATGTGACTGGTGTTGTGGCCCGTAACTTCAACTATGGCAACGTTACCCTGTGCGTTGATAGTGTAATCTCCAACACCAACCACGTCTACGCCAACGCTGGGAACACCGACGATAAGGAGTCCCGTGGCTATGTTCGTACAGTCGCTAACATTCGCGGGACTCGCGTAGCCTTCTATGTTACACACATGAGCTATATGACAAATCGGTTGATCCCGATGTTCACTGAGCTGGTTAACGCCGTTAAGCTGGACCCTGAGACAAAAATCGTGGTGATGGGCGACTTCAACACTGACAGGGAGGACCTGTTTAAGCTGTTCACCGATGAGGGCTTCGTGTCTCATAACAACAAAGAGTTCAACACCAATAACACTGGCGGGACTTGGTATATCGACAATATCCTGACCAAGGGATTTGGCGCAGTGGTAGAGAAGGGGACTCAGGATAGCGCAGCTAAACTTGCAGACCACAAGATGTTCTTCGTAGAGATGGAGGTATAA

Genome Context

Genome Context

Gene Ontology

Description Category Evidence (source)
GO:0098015 virus tail Cellular Component IEA:UniProtKB-KW (UniProt)
GO:0003824 catalytic activity Molecular Function IEA:InterPro (UniProt)
GO:0098671 adhesion receptor-mediated virion attachment to host cell Biological Process IEA:UniProtKB-KW (UniProt)
GO:0046718 symbiont entry into host cell Biological Process IEA:UniProtKB-KW (UniProt)

Tertiary structure

PDB ID
2c85015395c80bd57063937106bb15775ee2821468083ff9c19d610b3cace098
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7987
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50