Protein

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Genbank accession
XNP00645.1 [GenBank]
Protein name
tail collar fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,89
TSP
Evidence RBPdetect2
Probability 0,89
Protein sequence
MSNNTINHVSDKSIYVTFDPTGTDWPDTITNVQDALEKIGSWARTDTGLPIATTSVRGIAQIATEADIDAGTDNTKIVTPKLLAYRMQNPKASQTVWGYTKYSTDAESTTVTNDASSITPRSLNYVFNNRKGTESVWGSSKIATTAQAVAGTDNTVTMTPLKVKQAIASLVPVQSSATESSQGLVQLATVAQVQAGTIREGYAISPYTFIRLTATESNLGVIRIASQAEANAGTDDTKAITAKKLINTRATGSQFGVVKLATTVGYVANTALSSNANVLPSDRSAVINGSLYENSAIHNNKYQTWTDLDWHFPVGAIVMTGFQTDHGSLYICDGRSLNKNNYPLLFERIGYTFGGGGDWFNIPDCRGVAVRGHDRGRGLNPNRGYGTYEGDMLGWHEHPLQLIYQNGGNIPKWQAVYELKSAEKNDQSARVFDASITKATGVGGEETRMKNIALNYVIRTQ
Physico‐chemical
properties
protein length:461 AA
molecular weight: 49831,93440 Da
isoelectric point:7,05965
aromaticity:0,08026
hydropathy:-0,34902

Domains

Domains [InterPro]
DC_0176
STR
1–400
DC_0176
SSF69349
STR
242–321
SSF69349
IPR037053
ATT
301–366
IPR037053
SSF88874
STR
304–460
SSF88874
IPR011083
ATT
315–368
IPR011083
XNP00645.1
1 461
Architecture
STR
ATT
STR
STR 1-300 | ATT 301-368 | STR 369-460 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XNP00645.1
1 461
Domain Start End Length (AA) Confidence
N-terminal 1 275 275 0,8774
Central domain 276 450 176 0,0237
C-terminal 451 461 10 0,9965
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-275
Central
276-450
C-terminal
451-461

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage Roth90
[NCBI] 		3384150 Viruses > unclassified bacterial viruses >
Host Klebsiella sp.
[NCBI] 		576 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XNP00645.1 [NCBI]
Genbank nucleotide accession
PQ657830 [NCBI]
CDS location
range 118616 -> 120001
strand +
CDS
ATGAGTAACAATACAATCAACCACGTAAGTGATAAATCCATTTACGTGACATTTGACCCAACAGGTACTGATTGGCCTGATACCATAACCAACGTACAAGATGCGTTGGAAAAAATAGGTAGTTGGGCGCGTACTGATACTGGGCTTCCTATCGCAACAACTTCTGTTCGTGGTATTGCTCAGATCGCAACCGAAGCTGATATTGACGCTGGCACGGATAACACTAAGATTGTTACTCCGAAACTGTTAGCATATCGTATGCAGAACCCTAAAGCATCACAAACCGTATGGGGTTATACGAAGTATTCGACTGATGCGGAATCTACAACCGTAACTAACGATGCATCGTCTATTACTCCGCGATCTCTGAACTATGTGTTCAATAACCGTAAAGGTACAGAATCGGTTTGGGGTTCTTCTAAAATTGCTACCACTGCACAGGCGGTTGCTGGTACAGATAACACTGTAACTATGACTCCGCTTAAAGTCAAGCAAGCGATCGCGTCTCTGGTTCCTGTTCAGTCAAGTGCGACCGAAAGCTCGCAAGGTTTGGTACAACTGGCAACAGTTGCACAGGTTCAGGCTGGTACGATCCGTGAAGGGTATGCAATTTCACCTTATACGTTTATTCGTTTAACTGCAACTGAAAGCAACTTGGGCGTTATTCGCATCGCATCACAGGCAGAAGCAAACGCAGGTACTGATGACACCAAAGCGATTACTGCGAAAAAATTAATCAATACCCGTGCAACTGGATCCCAGTTCGGTGTTGTCAAATTAGCAACAACTGTTGGTTATGTGGCAAACACTGCACTTTCTTCTAATGCTAATGTATTGCCTAGCGATCGTAGTGCGGTAATTAATGGTTCTCTTTATGAGAATAGCGCAATACATAACAACAAATATCAGACGTGGACAGATCTTGATTGGCATTTCCCAGTAGGTGCTATTGTCATGACTGGTTTCCAGACTGACCACGGTAGTTTGTATATTTGTGATGGACGTTCACTGAATAAAAATAATTACCCGTTACTGTTTGAGCGTATAGGTTATACATTTGGTGGTGGCGGTGATTGGTTTAACATTCCAGACTGTCGAGGCGTTGCAGTACGTGGTCATGACCGTGGGCGTGGACTAAACCCTAATCGTGGGTATGGTACATATGAAGGAGATATGTTGGGATGGCACGAACACCCATTACAACTTATCTACCAGAACGGCGGTAACATTCCGAAATGGCAAGCAGTTTACGAACTGAAAAGCGCCGAGAAGAATGACCAAAGCGCTCGCGTATTTGATGCTTCTATAACTAAAGCTACTGGTGTGGGCGGTGAAGAAACCCGCATGAAAAACATCGCATTAAACTACGTAATTCGTACTCAATAG

Genome Context

Genome Context

Tertiary structure

PDB ID
51a37be5bb1c47f56e6f0b210dd1ecc04eeb69359c3795e74b83dc736b9c569e
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7241
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
KlebPhaCol: A community-driven resource for Klebsiella research identified a novel gut phage order associated with the human gut Rothschild-Rodriguez,D., Lambon,K.S., Latka,A., Costa,A.R., Mantzouratou,A., King,C., Boeckaerts,D., Sheridan,E., Merrik,F., Drobniewski,F., De Angelis,I., Saeed,K., Sutton,M., Wand,M., Andrew,M., Hedges,M., Brouns,S.J.J., Haas,P.-J., Krishnakant Kushwaha,S., Lawson,S., Fordham,S., Lee,Y.-J., Wu,Y., Briers,Y., Weigele,P. and Nobrega,F.L. 2024 — GenBank