Protein

View in Explore
Genbank accession
QJA42693.1 [GenBank]
Protein name
short tail fibers protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
Protein sequence
MSTNTLKHISDKSEFKSFDPTGSNFPPDITNVQEALATISLIGVTGNVPSATETSQGIIRLATTQEVMDGLDAYSAVTPATLKARLDIPTQATETYVGITRYATNAEAIAGTEPQAAIVATSLKAVMDYTFENRLSTENATGVIKISTTPAALAGTDDTTAMSPLKVSQAIGAATAALPVYSTATTTNEGLVRLATNAEVGNGNLSVGIAISPAGLATLTSTEERSGIIKLAGWDMVSNGTDHTAAVTPASLLARTGNTGRIGLVRLSTTVGQGDGNTALAYNANVISTSGGEIWGTLNVNGALRRNGVDVVTHDQLSDSVPVGTICMWGGHEGNIPGKWRACVGGTYTGGAYLNAVGGRWGWWGAIPDFRGLYPRGANMVGGYSEGEVNPHIAGNRGEDGKGKARLGNGVGSFPQSSVQAQALRYHKHAGGFGEHDNYGAFGNTANSGYVGTRKGLDWDNRSYFTNEGFETTDPWNRDGHSTLNSEGLIANETRPWTMSVLFIIKVE
Physico‐chemical
properties
protein length:508 AA
molecular weight: 53054,24410 Da
isoelectric point:5,46066
aromaticity:0,06890
hydropathy:-0,21201

Domains

Domains [InterPro]
DC_0176
STR
1–421
DC_0176
G3DSA:2.10.280.10
Unmapped
248–285
G3DSA:2.10.280.10 SSF88874
SSF69349
STR
248–333
SSF69349 IPR044916
IPR015173
STR
251–309
IPR015173 IPR027448
QJA42693.1
1 508
Architecture
STR
STR 1-507 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Enterobacteria phage vB_EcoM_IME540
[NCBI] 		2719567 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QJA42693.1 [NCBI]
Genbank nucleotide accession
MT150133.1 [NCBI]
CDS location
range 134518 -> 136044
strand +
CDS
ATGTCAACAAACACACTAAAACACATTAGTGATAAATCGGAATTCAAATCATTCGACCCTACTGGGTCGAATTTCCCACCTGATATTACTAATGTTCAAGAAGCATTGGCAACTATTTCATTAATCGGTGTCACAGGTAATGTTCCTTCAGCCACAGAAACATCCCAAGGTATTATTCGTCTGGCCACAACACAAGAAGTAATGGATGGATTGGATGCTTATAGTGCAGTGACCCCAGCAACTTTAAAAGCCCGTTTAGATATTCCTACTCAGGCAACAGAAACTTATGTAGGTATCACCCGTTACGCTACTAACGCTGAAGCTATAGCAGGCACAGAGCCCCAGGCTGCAATCGTAGCAACCTCTTTGAAAGCGGTAATGGATTATACATTTGAGAACCGTTTATCAACAGAGAACGCCACAGGCGTTATCAAGATTTCAACTACACCTGCTGCATTAGCTGGTACCGATGATACCACAGCGATGTCCCCACTTAAAGTATCGCAAGCAATTGGTGCAGCGACAGCAGCTTTACCGGTTTATTCTACGGCAACGACTACAAATGAAGGTTTAGTTCGTTTAGCGACTAATGCTGAAGTTGGTAATGGAAATCTTTCTGTAGGTATCGCTATTTCTCCAGCAGGATTAGCCACATTAACTTCCACCGAAGAACGAAGCGGTATTATTAAACTCGCTGGTTGGGATATGGTATCTAATGGTACTGACCACACCGCCGCTGTTACACCTGCTTCTTTGTTAGCTCGTACAGGTAATACCGGACGCATTGGATTGGTTCGATTATCTACTACCGTAGGTCAAGGCGACGGTAATACAGCACTGGCTTATAATGCTAACGTTATTTCTACTTCAGGCGGTGAAATATGGGGTACTTTAAACGTTAATGGCGCATTACGCCGTAATGGTGTTGATGTTGTTACCCACGACCAATTATCAGATAGCGTCCCGGTAGGTACTATTTGTATGTGGGGTGGCCATGAAGGTAATATACCTGGTAAATGGCGTGCTTGTGTAGGTGGGACTTACACCGGTGGAGCATATTTAAATGCTGTTGGTGGACGTTGGGGATGGTGGGGTGCTATTCCGGATTTCCGTGGATTATATCCTCGTGGCGCTAACATGGTTGGCGGATATTCTGAAGGCGAAGTTAACCCACATATTGCCGGTAACCGAGGAGAAGACGGTAAAGGTAAAGCCCGTTTAGGTAATGGTGTTGGTTCGTTCCCACAATCTTCCGTTCAAGCCCAAGCATTACGTTATCATAAACATGCTGGTGGTTTTGGTGAACACGATAACTATGGCGCTTTTGGTAACACCGCTAACTCCGGATATGTTGGTACTCGTAAAGGACTTGACTGGGATAACCGTAGTTATTTTACTAACGAAGGGTTTGAAACCACCGATCCTTGGAACCGTGATGGCCATAGCACACTGAATAGTGAAGGACTTATTGCAAATGAAACACGTCCTTGGACAATGTCCGTTCTTTTTATTATTAAAGTAGAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
f852805134a269242a8653586931ce9f15e76943c2db1847168d0479d92417a9
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6761
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50