Protein

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Genbank accession
QGH73782.1 [GenBank]
Protein name
putative tail tubular protein B
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MAVYEGVYKSLLQGVSQQTPQERTDGQLAEQINMVSDPVTGLRRRSGTKLLHVSWLDPEGFLDIVKINGVPRLVHIDTSTGTLTVVPDIAQEQLTLDNVYQVTRAEFVTDGGKSALKTVTIGNEYYIANTELVPRVVPSSTANDKLDPSKHGYFSVRSTAFERYYTIVITYGSEYYSAGWTTGNTAAGASPESVAVGLVATLKANHPNIVDKLNFHRQGNTVAVEVINKSSTGVLEVTSTTGSTYMFTSGLSRVTSKTELLGTLPAALDNYVVGVGTEKNSAYYKYGHSNRVWAEVGAYTPPTKYVDVPLVVDLSEDDAITVQPLDLKSRSAGDELNNPYPSFIDYGITGLGAYQSRLVILSGAFVCLSKTTDYTEFMRTTVEELLDDDAIEISSASLSSAQFEYAVPFNKDLVLIAQGQQAVIPANSTVLSPKTAVIYPSTTLEVSLAVKPVTASRTMYYVFQQGSDYYQVGEFIPNAYTEAQLYSQNLTDHIPLYAEGVCTSVAASTNNNMIVFCSGTTDLLVHQYMWVGDDRPLMAFHKWRFADQIKHVQFLDDYLVLFSKDSLGNLVISTANTQLNQLTTKPVPYLDNYVYVDIPSTGRVDVSSSPTWGVVSDTQAQAVIYDSTTARHSVVKYSLDLFAMVCPYVGRVAVGTPYESTFTLTPPFIRDNNGKVVTGTRTTLQSLKMTYKNTGTFNVEVADTMGQSYDDERTAYTWSEADLGYTWVNSVGSVNVPCRTRLSSTECTVSTSGTTDMNLITTEYIVRTAQKRRRM
Physico‐chemical
properties
protein length:775 AA
molecular weight: 85061,50520 Da
isoelectric point:5,07523
aromaticity:0,09677
hydropathy:-0,14465

Domains

Domains [InterPro]
IPR058003
TTP
1–774
IPR058003
DC_0058
STR
1–775
DC_0058
QGH73782.1
1 775
Architecture
STR
STR 1-775
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QGH73782.1
1 775
Domain Start End Length (AA) Confidence
N-terminal 1 145 145 0,9881
Central domain 146 345 201 0,1264
C-terminal 346 775 429 0,2539
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-145
Central
146-345
C-terminal
346-775

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage vB_VhaP_VH-5
[NCBI] 		2660694 Uroviricota > Caudoviricetes > Autographivirales > Linggongvirus > Linggongvirus VH5
Host Vibrio harveyi
[NCBI] 		669 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QGH73782.1 [NCBI]
Genbank nucleotide accession
MN497414 [NCBI]
CDS location
range 25116 -> 27443
strand +
CDS
ATGGCAGTTTATGAAGGAGTTTATAAATCCTTACTACAAGGTGTTTCCCAACAAACGCCACAAGAGCGTACTGATGGGCAGTTAGCTGAGCAGATTAATATGGTTAGTGACCCTGTTACGGGTCTACGTAGACGTAGTGGTACGAAGTTGCTCCACGTTAGCTGGTTAGACCCCGAAGGTTTCCTTGATATAGTTAAGATTAACGGGGTGCCTCGCTTAGTACATATAGATACCTCTACAGGTACACTCACAGTTGTACCTGATATAGCTCAAGAGCAACTAACCTTGGACAATGTTTATCAAGTAACTCGTGCAGAGTTTGTAACTGACGGTGGTAAATCCGCTTTAAAAACAGTTACTATAGGTAACGAGTATTACATTGCCAACACAGAGCTAGTACCTAGAGTGGTTCCTAGTAGTACTGCTAATGATAAGTTAGACCCGTCTAAACACGGTTATTTTAGTGTACGTAGTACAGCTTTTGAGAGATACTACACGATTGTAATTACCTACGGTTCAGAGTATTATAGTGCTGGTTGGACAACAGGTAATACTGCTGCGGGCGCTTCACCTGAGTCTGTTGCGGTAGGTTTAGTAGCTACCCTCAAGGCTAACCACCCTAATATAGTGGATAAATTAAACTTCCACCGTCAAGGTAACACCGTGGCTGTCGAGGTAATTAATAAGTCCAGTACAGGAGTTTTAGAGGTAACTTCTACAACTGGTAGTACTTATATGTTCACGTCGGGTCTTTCTCGTGTAACCTCTAAAACAGAGTTACTAGGTACATTACCTGCTGCTTTAGATAATTATGTGGTGGGTGTAGGTACAGAGAAAAACTCTGCATACTACAAGTATGGCCATAGTAACCGTGTCTGGGCAGAGGTAGGTGCGTACACGCCCCCCACGAAGTATGTGGATGTACCTTTGGTAGTGGATTTGTCAGAAGACGATGCTATTACAGTGCAACCGTTAGATTTAAAATCTCGCAGTGCTGGTGACGAGTTGAATAACCCTTACCCTAGTTTTATAGATTACGGTATCACAGGGCTAGGCGCATACCAGTCTCGTTTAGTTATATTGAGCGGGGCATTTGTATGTCTAAGTAAGACTACGGACTACACTGAGTTTATGAGGACTACTGTTGAAGAATTACTTGATGACGACGCTATCGAAATCAGTTCAGCGTCCCTCAGTTCAGCACAGTTCGAGTACGCTGTACCCTTCAATAAGGACTTAGTTCTAATTGCACAAGGTCAGCAAGCTGTTATACCTGCAAACAGCACTGTACTGTCGCCTAAGACTGCGGTAATCTACCCTAGTACAACTTTAGAGGTTTCCCTAGCTGTAAAGCCAGTGACCGCCTCACGTACTATGTACTACGTGTTCCAGCAAGGTTCTGATTACTATCAGGTGGGAGAGTTCATCCCAAACGCTTACACAGAGGCACAGTTGTATTCTCAAAACCTTACAGACCATATACCTTTGTATGCTGAGGGTGTATGCACCTCTGTAGCTGCAAGTACCAATAACAATATGATAGTGTTCTGCTCAGGTACAACTGACCTACTGGTACATCAGTATATGTGGGTGGGGGATGACCGCCCTCTCATGGCTTTCCATAAATGGCGTTTTGCAGACCAGATTAAGCACGTACAGTTCCTAGACGATTATCTTGTCCTGTTCTCCAAAGACTCTTTGGGTAACTTAGTTATCAGTACAGCCAATACACAGTTAAACCAGTTGACTACTAAACCTGTACCTTACTTGGATAACTATGTGTATGTAGATATTCCTAGTACGGGGCGGGTAGATGTATCGAGTAGCCCAACATGGGGTGTAGTGAGTGATACTCAAGCGCAGGCAGTTATCTATGATAGCACCACAGCGCGTCATAGTGTTGTTAAGTACTCCCTCGACTTATTCGCTATGGTTTGCCCTTACGTGGGGCGTGTTGCTGTAGGTACCCCTTATGAGAGTACCTTTACACTTACTCCCCCATTCATACGAGATAACAACGGTAAGGTGGTTACAGGTACTAGAACCACACTACAGAGTCTCAAGATGACGTACAAGAACACAGGGACGTTTAACGTAGAGGTTGCTGATACAATGGGGCAGTCTTATGACGATGAACGTACTGCATACACTTGGTCAGAGGCAGACTTAGGTTATACATGGGTGAACTCAGTAGGGTCTGTAAATGTACCTTGCAGAACACGTCTATCTAGTACAGAATGTACAGTCAGTACATCAGGTACTACAGACATGAACCTTATTACCACAGAGTACATAGTACGTACTGCACAGAAAAGACGGAGGATGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
a244df268493dbd7aa96e5b4907e48dfbee0d56d66d5cd8ad827dd990c992d07
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3300
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50