Protein

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Genbank accession
AAM88710.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MDPISVSDVALDTIWESEIAWQIVRDVAMAVGKFVAGLVELDGADYADIGEVADDAAAMDLVSVDQRAMDAVSASAVAMEAVAASTIAMDAAIASEDIALPTIVETETAMNEVSLSDLALDSLWESDVAWGMIRDLSMAVGKFAVGRAGLSGYDYADIDDVASSQTAMDAVSTSETAMDAVSTSETAMDAVSTSETAMDAVSTSETAMDAVSASTLAMDAIWDSQLAWDTVAAVSMAVGKFVAARAGLEGSNYADIDAVASDQTAMDSVAASIIARTAAISSAYTYDTIWSTDLASGTIWDTGDFANDPTNSGWWSQSFDLSNSSTFSVYTRADNGSPDLKIKIGGSEVFGTDSDHSSWTERSFDVSSYSGETTIELGLEGYDNSPDDYISDRYNGRSGGESLYIRMETFGSVGSSSEYAEFSDMKLE
Physico‐chemical
properties
protein length:428 AA
molecular weight: 44952,49670 Da
isoelectric point:4,05003
aromaticity:0,07944
hydropathy:0,01238

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Natrialba phage PhiCh1
[NCBI] 		114777 Uroviricota > Caudoviricetes > Vertoviridae > Myohalovirus alkaliphilum > Myohalovirus phiCh1
Host Natrialba magadii ATCC 43099
[NCBI] 		547559 Methanobacteriota > Halobacteria > Halobacteriales > Natrialbaceae > Natrialba > Natrialba magadii

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AAM88710.1 [NCBI]
Genbank nucleotide accession
AF440695.1 [NCBI]
CDS location
range 25916 -> 27202
strand -
CDS
ATGGATCCGATCAGCGTGTCCGACGTCGCGTTGGATACGATCTGGGAGAGCGAAATCGCTTGGCAGATCGTCCGAGACGTCGCGATGGCGGTCGGAAAGTTCGTTGCTGGACTGGTCGAACTCGACGGGGCGGACTACGCCGATATCGGCGAAGTCGCAGACGACGCGGCCGCGATGGATCTGGTCTCTGTCGACCAGCGGGCAATGGATGCGGTGAGCGCGTCCGCCGTCGCGATGGAGGCAGTCGCCGCCTCCACTATCGCGATGGATGCCGCGATCGCCTCGGAGGACATCGCGCTACCGACAATCGTCGAAACTGAGACGGCCATGAACGAGGTCAGTCTCTCCGATCTCGCGCTCGATTCGCTCTGGGAGAGCGACGTTGCGTGGGGGATGATCCGCGACCTCTCGATGGCCGTCGGGAAGTTCGCTGTGGGCCGAGCGGGCCTCAGCGGCTATGACTACGCCGATATCGACGATGTCGCCTCCTCTCAGACCGCGATGGACGCGGTAAGTACGTCCGAGACGGCCATGGACGCGGTAAGTACGTCCGAGACGGCCATGGACGCGGTAAGTACGTCCGAGACGGCCATGGACGCGGTAAGTACGTCCGAGACGGCCATGGACGCGGTAAGTGCCTCCACCCTCGCGATGGATGCGATCTGGGATTCGCAGCTTGCCTGGGACACCGTTGCTGCCGTCTCGATGGCGGTCGGGAAGTTTGTAGCCGCCAGAGCGGGCCTGGAGGGCTCGAATTACGCCGATATCGATGCCGTCGCGTCTGACCAGACGGCGATGGATTCGGTTGCGGCGTCCATCATCGCAAGAACCGCTGCGATTTCCAGTGCGTACACGTACGACACGATCTGGTCGACAGACCTCGCGAGCGGCACCATCTGGGACACGGGCGACTTCGCGAACGACCCGACGAACAGCGGTTGGTGGAGCCAGTCGTTCGATCTCTCGAACAGCAGCACCTTCAGCGTCTACACGAGGGCGGACAACGGATCGCCTGATCTGAAAATTAAGATCGGTGGATCGGAGGTATTCGGCACAGACAGCGACCACTCCTCTTGGACTGAGCGGAGCTTTGACGTCTCCTCGTACAGCGGTGAGACGACGATCGAGCTCGGGCTCGAAGGCTACGACAACAGTCCGGATGACTATATCTCGGACCGGTACAACGGTCGTTCAGGCGGCGAATCTCTTTACATCCGAATGGAAACGTTCGGCAGCGTTGGTAGTTCGTCTGAATATGCCGAGTTCAGCGACATGAAACTCGAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
db453b5e5152c7c9caec653a0eb288fc7b0e57532f119d962781c5194d36cbea
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7733
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Sequence analysis of the temperate virus PhiCh1 infecting the haloalkalophilic archaeon Natrialba magadii Klein,R., Baranyi,U., Roessler,N., Greineder,B. and Scholz,H. 2002-07-25 — GenBank