Protein

View in Explore
Genbank accession
XOL10495.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence RBPdetect2
Probability 0,77
Protein sequence
MASLPHTRAYPKQWKFKARRSTAGWTGGVWYPEKCLVKMQGYDGQGNQHEIHAMNPAHILYECQSNYEWGRGLSRTLIDDTTFRLAADTLFNENFGLCIRWNRQDTLESFMQLILDHIGGAMYVSKVTGKLSLRLIRKDYDFDTLPIFDTDSGLLSIQEATNASPANLVNEVVVTYHNPVMDEDQQVRSHNLAQIQNQGCLNSNTIEYLGIPTGKLAMQVAQRDLRAASTNVRRFTVICDRRAWNVQPGDVLKVRDPKQRGLTEVVIRVGTVEDGTLPDGKIKVVALQDQFAFQLNTFNQVEPPAGYEPNLTPAIARRIVYEMPYVDLVQQLPDGELNAVGPNDAFINSQAEKPTDMSAAYDMGIMAEGESGFDVRGNGDFGAFGSLASDIDYLSTQIVLSEMTDMWDDVQPGFVARIAKPVLDGQRTQMEIAEEFVRIDAINGNVITVARGVLDTIPFRHQKSEMLWVTTYDGGTDWQKYAGNESIDIKILPWTLGGGRFPIEDAPIDHLDMDFRQIRPYPPGNVQHYLASTSTLQRWYVPSALTYTANAGETPDTYTLTWAHRDRVLQGDKPVPHIDGDIGPEPGTSYTIRVYNQEGTLVRTESGINGTTWNWPYATAAADMNVEASLFDPVLATLRLTSARNGRESWEYYEMKVSVYKKPPQFVYDASLMQFAAQPYNATSDPNPPTPPMDGPYVSSLMQFAAQPDGSEDFGPAESMNGPNVALLPHQVTQTSSIITPLDTLLYETPYIQLSRDGRDLNTSKVSAYVARSSDRTVDSYTLFTKHETDANYTSSGTQPWTPWGMSTVGLGFFTDEVTIDPTSDKDGVPVAPAKVGDLLLIDQELVSITAINGRTYKIGRGVADTIPAQHYSSRPVWLISVGFGYSDMAFGDNEKAMVIIRPDTYGTDIPLSKLYPLQLQMQYRPKRPYPPGLMMIGGQPFFNTASGLADDFNPYDNLKAKDVVCTYAHRNRVSQSTTARDHFAVGITPEPGVKYRVRIGYAYWSQSGSGFSLLSQFETEDAGFIMRAADLERWGRQAGYAQDAGGYSTLNVTVNAIRDGMLNWQGYTMTVRVPSFPLPPGQKPGGGDGPWNPPGGGNTGGTTPPTEPPDRPDPSEPGTTDPSEPTKPDEPEEPQPPVDPEDPDTDPPEPPEPPVDPTNVPGWSLSWDHGWAMTLPDFRYVPPADEEPE
Physico‐chemical
properties
protein length:1190 AA
molecular weight: 131751,69420 Da
isoelectric point:4,71794
aromaticity:0,09664
hydropathy:-0,47773

Domains

Domains [InterPro]
DC_1657
STR
96–296
DC_1657 DC_1311
IPR032876
ATT
104–272
IPR032876
DC_1311
RBD
261–662
DC_1311
XOL10495.1
1 1190
Architecture
ATT
STR
RBD
RBD
ATT 96-272 | STR 273-296 | RBD 297-662 | RBD 700-1060 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage As4
[NCBI] 		3388312 No lineage information
Host Salmonella typhimurium
[NCBI] 		90371 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XOL10495.1 [NCBI]
Genbank nucleotide accession
PQ785584 [NCBI]
CDS location
range 2057 -> 5629
strand +
CDS
GTGGCGTCGTTACCGCATACTCGCGCGTACCCGAAGCAGTGGAAATTCAAGGCCCGCCGCTCTACGGCCGGGTGGACTGGCGGCGTCTGGTATCCGGAAAAATGTCTGGTCAAGATGCAGGGGTACGACGGTCAGGGCAATCAGCACGAAATCCACGCCATGAACCCGGCGCACATCCTGTATGAGTGCCAGTCGAACTACGAGTGGGGCCGTGGCCTGTCACGCACGCTTATCGACGATACGACGTTCCGCCTCGCGGCCGACACCCTGTTTAACGAGAACTTCGGCCTTTGCATCCGATGGAACCGTCAGGACACGCTCGAATCGTTCATGCAGCTTATTCTCGACCATATCGGCGGCGCGATGTACGTCAGCAAAGTGACGGGCAAACTGTCCCTGCGGTTGATCCGGAAGGACTACGACTTCGATACGCTGCCGATCTTCGACACGGATTCCGGCCTGCTGTCCATTCAGGAAGCGACCAACGCGTCTCCGGCCAATCTGGTTAACGAAGTGGTCGTGACTTACCACAACCCGGTCATGGACGAAGACCAGCAGGTGCGAAGCCATAACCTCGCGCAGATCCAGAATCAGGGATGTCTGAACAGCAACACGATTGAATACCTCGGCATCCCTACCGGGAAACTGGCGATGCAGGTGGCGCAGCGTGACTTGCGTGCCGCGTCAACCAACGTCCGCCGTTTCACCGTCATTTGTGACCGCCGGGCATGGAACGTGCAACCGGGCGACGTGCTGAAAGTGCGTGACCCGAAACAGCGCGGCCTGACCGAAGTTGTTATCCGCGTCGGTACAGTTGAAGACGGCACGCTGCCGGACGGCAAGATCAAGGTTGTCGCGCTGCAAGACCAGTTCGCCTTCCAGTTAAACACGTTCAACCAAGTCGAGCCGCCTGCCGGGTACGAGCCTAACCTGACGCCCGCGATTGCCCGCCGCATCGTGTACGAAATGCCGTACGTGGATTTGGTGCAGCAGTTACCGGACGGGGAACTGAATGCCGTTGGCCCTAACGATGCGTTTATCAACTCGCAGGCCGAGAAGCCGACCGACATGTCTGCCGCGTACGACATGGGTATCATGGCCGAAGGTGAATCCGGCTTTGACGTCCGGGGTAACGGTGACTTCGGCGCGTTCGGATCGCTGGCCTCCGACATCGACTACCTGTCAACGCAAATCGTTTTGTCCGAAATGACCGACATGTGGGACGACGTGCAGCCCGGATTTGTGGCGCGCATCGCCAAGCCTGTTCTTGACGGCCAACGCACGCAGATGGAAATCGCCGAAGAGTTTGTCCGCATCGACGCCATCAATGGCAACGTGATTACCGTGGCGCGCGGCGTACTCGACACCATCCCATTCCGCCACCAGAAAAGCGAAATGCTTTGGGTGACGACGTATGACGGCGGTACCGACTGGCAGAAATATGCGGGCAACGAATCAATCGACATCAAAATCCTGCCGTGGACATTGGGCGGCGGCCGCTTCCCGATTGAAGATGCGCCGATTGATCATCTGGACATGGACTTCCGTCAGATCCGGCCATACCCGCCGGGCAACGTGCAGCACTATCTCGCTTCGACATCAACGCTGCAACGCTGGTATGTCCCGTCCGCGCTGACCTACACGGCCAACGCCGGGGAAACACCTGACACGTACACCCTGACTTGGGCGCACCGCGACCGCGTACTGCAAGGCGATAAGCCCGTCCCGCACATCGACGGCGACATCGGGCCAGAACCGGGAACCTCGTACACCATTCGCGTCTACAATCAGGAAGGCACATTGGTTCGCACCGAGTCCGGCATCAACGGCACGACGTGGAATTGGCCGTACGCAACCGCAGCGGCTGACATGAATGTCGAAGCCAGCCTGTTCGATCCGGTGCTCGCGACGCTCCGCCTGACGTCTGCCCGCAATGGCCGTGAAAGTTGGGAATACTACGAAATGAAGGTCAGCGTTTATAAGAAGCCGCCGCAGTTCGTATATGACGCCAGCCTGATGCAGTTCGCCGCGCAGCCGTACAACGCCACCAGCGATCCTAACCCGCCAACGCCACCGATGGACGGCCCGTATGTTTCATCCCTGATGCAGTTTGCCGCGCAGCCAGATGGTAGCGAGGACTTCGGCCCGGCGGAAAGCATGAATGGCCCGAACGTGGCGCTACTGCCGCACCAAGTCACGCAGACGTCGTCAATCATTACGCCGCTCGATACGCTGCTGTATGAAACGCCGTACATCCAGTTATCCCGCGACGGCCGTGACCTGAATACATCGAAGGTCAGCGCATACGTGGCCCGGTCTTCTGACCGCACCGTCGATTCGTACACCCTGTTCACCAAGCACGAAACGGACGCGAACTACACGTCGTCCGGGACTCAGCCGTGGACACCGTGGGGCATGTCAACCGTCGGCCTCGGCTTCTTCACGGACGAAGTGACCATCGACCCAACGTCCGATAAAGACGGCGTTCCGGTAGCTCCCGCGAAGGTTGGTGATCTGCTGCTTATCGATCAGGAATTGGTGTCCATTACCGCCATCAACGGCCGCACGTATAAGATTGGTCGTGGCGTAGCAGATACCATCCCGGCGCAGCACTACAGCAGCCGTCCTGTCTGGCTGATCTCCGTGGGCTTCGGCTACTCCGACATGGCATTCGGCGACAACGAAAAAGCGATGGTCATCATCCGCCCGGATACCTACGGCACCGACATTCCGTTGAGCAAGCTGTACCCGCTCCAATTGCAGATGCAGTACCGTCCGAAACGTCCATACCCGCCGGGCCTGATGATGATTGGCGGCCAACCGTTCTTCAATACCGCGAGCGGACTGGCTGACGATTTCAACCCGTACGACAACCTGAAAGCGAAGGACGTGGTATGCACGTACGCACACCGCAACCGTGTATCGCAATCCACCACGGCGCGCGACCACTTCGCCGTCGGCATCACTCCGGAACCGGGCGTGAAGTACCGCGTGCGCATTGGTTATGCGTACTGGTCGCAGTCAGGTAGCGGCTTCTCGCTGCTGTCTCAGTTCGAAACGGAAGACGCGGGCTTCATTATGCGTGCCGCCGACCTCGAACGTTGGGGCCGTCAGGCGGGCTATGCGCAGGACGCTGGTGGCTATTCCACGTTAAACGTGACCGTCAACGCGATTCGTGATGGAATGCTGAACTGGCAGGGGTATACGATGACCGTGCGCGTGCCGTCCTTCCCGCTTCCTCCGGGACAGAAACCGGGCGGTGGCGATGGGCCGTGGAACCCGCCGGGTGGTGGCAATACTGGCGGTACTACTCCGCCGACGGAGCCGCCGGATCGTCCAGACCCGAGCGAGCCGGGCACCACTGACCCATCCGAGCCGACGAAGCCGGACGAGCCGGAAGAACCGCAGCCACCAGTCGATCCGGAAGACCCGGATACTGACCCGCCGGAACCGCCGGAACCGCCCGTTGACCCGACCAACGTACCGGGCTGGTCATTGAGTTGGGATCACGGTTGGGCGATGACACTGCCAGATTTCCGATATGTTCCACCAGCAGACGAGGAACCTGAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
fd717d53bc3a5ae3933092fc1a9dcfc7ec91dfb671cd2a4ad9f816d546177734
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2807
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Surface-mediated Bacteriophage Defense Incurs Fitness Tradeoffs for Interbacterial Antagonism Tsai,C.E., Wang,F.Q., Yang,C.W., Yang,L.L., Nguyen,T.V., Chen,Y.C., Chen,P.Y., Hwang,I.S. and Ting,S.Y. — — GenBank