Protein

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Genbank accession
XIF73300.1 [GenBank]
Protein name
tail protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MNEMFSQGGKGSTGILTNKQAIARKFGVKQSEVLYAKPGAVLTGYKVIYDKVTQRSYALPSNLPAGATITSLTDGILVHNTGTVDLGALAALRGEFVTLVENFTTGFTIKVRNEIVSDGANLYRWKGTLPKTVNAGATVANTGGISDTAWGYDVFPNLKNVGSEVVGYKKSATGAILSSISKRFQKVYDAVADFGADPTGQVDSYAALQAWADACVADNWATAQINGIFKISQPILFHNILGLTIVADCYIYPTFDTGDYVVGWCNGQGVRTVGRMEVSGQSKIGIKTGHKIWSDTSQGFSFSYFYGLNASDVLCGIQVGDTAYPDALLSEMSFIGGFTVGTPCAIRAIGTQCYINFNNFDAVSGAPGGLSAVTQYTIHNIGAQVKYIGGEIQHNNNILGAAVLMQPIVSATYGNQVGCFESLSTHIENQATLALIYNIDNVASPVTKKSVVSFVGSHGFHNQDNGGLIVVHETIKPVFEGTIVTRDIGFYTTTTTRTQPNIVAGPKTIVDYDPKGFGPGFVKGLQAVSGGILLFKRRVIYCARNTNGQSVGTSNTVLVYTEPQTSDDFYRWVTNYSAGRFTVPAGGLKNVEVNANLRVASGNIQLDVYVDSTLKTLSSPASSINSVRVYLGDLNEGQIIDVRGTASAATTTNGGGLEFMTITAER
Physico‐chemical
properties
protein length:666 AA
molecular weight: 70821,07180 Da
isoelectric point:7,08955
aromaticity:0,09610
hydropathy:0,03123

Domains

Domains [InterPro]
G3DSA:3.30.2020.50
ATT
1–94
G3DSA:3.30.2020.50 G3DSA:2.10.10.80
DC_0071
STR
1–664
DC_0071
IPR040775
RBD
99–150
IPR040775
XIF73300.1
1 666
Architecture
ATT
STR
ATT 1-152 | STR 153-664 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XIF73300.1
1 666
Domain Start End Length (AA) Confidence
N-terminal 1 203 203 0,9938
Central domain 204 523 321 0,9887
C-terminal 524 666 142 0,9887
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-203
Central
204-523
C-terminal
524-666

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage vB_CECAV_050
[NCBI] 		3373739 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella enterica subsp. enterica serovar Copenhagen
[NCBI] 		486990 Pseudomonadota > Gammaproteobacteria > Enterobacterales > Enterobacteriaceae > Salmonella > Salmonella enterica

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XIF73300.1 [NCBI]
Genbank nucleotide accession
PQ306799 [NCBI]
CDS location
range 118338 -> 120338
strand -
CDS
ATGAACGAAATGTTCTCCCAAGGTGGTAAAGGCTCCACTGGTATTCTTACCAATAAGCAAGCCATTGCCCGTAAGTTTGGTGTTAAACAATCTGAGGTTCTGTATGCCAAACCGGGTGCTGTCCTGACAGGATACAAGGTGATCTACGATAAGGTCACTCAGCGCTCCTATGCACTGCCTTCTAACCTGCCTGCTGGCGCTACCATCACCAGCCTGACAGACGGCATTTTAGTACACAATACGGGCACTGTCGACCTGGGCGCTCTCGCAGCTTTGCGTGGGGAGTTTGTGACTCTGGTGGAGAACTTCACAACTGGATTCACAATCAAAGTCCGCAATGAAATCGTGAGCGATGGGGCTAACCTTTACCGTTGGAAAGGGACTCTACCGAAGACTGTGAACGCGGGTGCCACCGTGGCGAATACAGGCGGTATTTCGGACACAGCTTGGGGATACGACGTATTTCCGAATCTGAAGAACGTCGGATCCGAGGTTGTCGGCTACAAGAAAAGTGCGACAGGCGCGATCTTGAGTTCCATCTCGAAACGATTTCAGAAGGTCTATGACGCGGTGGCCGACTTTGGTGCCGACCCGACAGGACAGGTAGACAGTTATGCTGCTTTGCAAGCCTGGGCAGACGCATGTGTTGCAGACAATTGGGCCACAGCCCAGATCAACGGCATCTTCAAGATTAGCCAGCCGATCCTGTTTCATAACATCCTTGGCCTGACCATCGTCGCAGATTGTTACATCTACCCGACATTCGATACCGGAGATTACGTTGTTGGCTGGTGTAACGGCCAGGGTGTGAGGACTGTGGGACGAATGGAAGTCTCTGGCCAGAGTAAGATTGGCATCAAGACCGGACACAAGATCTGGTCAGATACGTCTCAGGGCTTCAGCTTCTCCTATTTCTATGGACTGAACGCCAGTGATGTACTGTGTGGTATCCAAGTTGGCGACACGGCATATCCAGACGCCCTTCTTTCGGAAATGTCGTTCATTGGTGGTTTTACGGTCGGCACGCCTTGCGCAATCCGTGCGATTGGCACCCAATGTTATATCAATTTCAACAACTTTGACGCTGTATCTGGTGCGCCTGGTGGCCTCTCTGCCGTGACACAATACACGATTCATAATATTGGCGCGCAAGTGAAGTACATTGGTGGCGAGATACAGCACAATAACAACATCCTGGGTGCGGCTGTCCTTATGCAGCCTATCGTGAGTGCGACCTATGGGAACCAGGTTGGCTGTTTTGAATCTTTGTCAACACACATTGAGAACCAAGCCACCCTTGCACTCATCTATAACATTGATAACGTCGCCAGCCCGGTGACCAAAAAGTCTGTTGTGTCCTTCGTTGGCTCACACGGGTTCCACAACCAAGACAACGGTGGCCTTATCGTGGTCCACGAAACTATCAAACCTGTATTTGAAGGCACGATTGTCACAAGGGACATCGGGTTCTACACGACCACGACGACCAGGACTCAGCCGAATATCGTGGCTGGACCGAAGACTATCGTCGATTACGATCCAAAAGGTTTCGGTCCTGGCTTCGTGAAAGGCCTCCAAGCTGTGTCTGGTGGTATTCTGTTGTTCAAGCGCCGGGTGATCTACTGCGCACGTAACACCAACGGCCAGTCTGTTGGAACGTCCAACACAGTACTGGTGTATACAGAACCTCAGACATCTGACGATTTCTATCGCTGGGTGACCAACTATTCCGCTGGGCGATTCACCGTTCCTGCGGGTGGCCTGAAGAACGTGGAGGTCAATGCCAACTTGCGTGTGGCATCTGGTAACATCCAGTTGGACGTGTACGTCGATAGTACTCTGAAAACTCTGAGTTCTCCGGCGTCAAGCATCAACAGCGTCCGCGTGTACCTGGGAGACCTAAACGAGGGGCAAATAATTGATGTCAGGGGCACGGCTTCTGCTGCGACCACCACAAACGGCGGAGGTCTTGAATTCATGACCATAACCGCAGAAAGATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
7ca972755e49eee8d6fb53addf0011f0a28c841d6a599b20e2a385e5581939fc
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7800
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50