Protein

View in Explore
Genbank accession
QVJ13480.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MAISNGPNLGIMANGALGDQHYNQFMAFLRAVDGLLMGHAKSATTTAQPASPADGDLYVLPASPTGTNWSGQGQRIARYSSVATAWEFFVPKKGWAISVEDTNSTYWYDGSAWKFLRGYGTTANRPAASAALVGGQYFDTTLGKPIWSTGSAWVDATGAAV
Physico‐chemical
properties
protein length:161 AA
molecular weight: 16989,72830 Da
isoelectric point:6,70822
aromaticity:0,12422
hydropathy:-0,13292

Domains

Domains [InterPro]
DC_0494
STR
1–160
DC_0494
IPR021251
STR
29–114
IPR021251
QVJ13480.1
1 161
Architecture
STR
STR 1-160 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage PSA39
[NCBI] 		2833444 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QVJ13480.1 [NCBI]
Genbank nucleotide accession
MZ089741.1 [NCBI]
CDS location
range 26825 -> 27310
strand +
CDS
ATGGCTATCAGTAACGGCCCGAACCTGGGCATCATGGCGAACGGCGCGCTGGGTGACCAGCACTACAACCAATTCATGGCTTTCCTCCGCGCGGTGGACGGCCTTCTCATGGGCCACGCGAAGTCCGCAACCACGACTGCTCAACCGGCTTCGCCCGCGGACGGGGACTTGTATGTGCTCCCGGCAAGCCCGACCGGCACGAACTGGTCGGGGCAGGGCCAACGGATCGCGCGTTATTCGAGCGTGGCGACGGCCTGGGAGTTCTTCGTGCCGAAGAAGGGATGGGCCATTTCCGTGGAGGATACCAACAGCACCTACTGGTATGACGGCAGCGCGTGGAAGTTCCTCCGCGGCTACGGCACGACCGCGAACCGCCCGGCGGCGAGCGCCGCCCTGGTCGGTGGCCAATACTTTGACACTACCTTGGGCAAGCCGATCTGGTCCACGGGCTCCGCCTGGGTGGACGCGACGGGCGCAGCTGTCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
e6e867c287df3b918fd94fd19768f7b7dd5921dbbc8aa6d0c3207eab59078f56
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,9514
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Lytic bacteriophages targeting P. aeruginosa isolated from hospital wastewater Nordstrom,H.R., Evans,D.R., Finney,A.G., Westbrook,K.J., Yassin,M.H., Doi,Y. and Van Tyne,D. 2021-07-09 — GenBank