Protein

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Genbank accession
AXF41504.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,90
Protein sequence
MSDNNVATQFPQGIQAPNISGLGYMSFDKNMTIDTTPSPIVVTRKDGEYNVLIDEGELINGFYIIDFSMNRKRFNLVVAVSGQGRNTGAAIDNSVNIISVLNEDPSLFKFKELSLAQKIGTTSVGIILTMTAISTVYDAASVEITGLSTQGRLSPSTNYNLFERTVVQRKYGYVNSVEVKDDAAGVNVDLNSISFSSIVYCNPATPGSRPNANGKGVCQTIAGTYNASMGAQMFISEENEMYFRSKVNGAYGFWTQIYTTKIYPKVVAAGSAVTTFSPTSPFDVSVPGIDLSRERFVILTTPEKISAVCGGVEVTNRANGSFGLVAKNDSGGNWTGKINWTIMESYSSSEEMTYSLQMGILQGSAFIESTTVSEGQMLRVIVNAPQNADGSLLAYNITQVSQSDIGIPLSGNVEIRSGNGIVDIPIVQDFLPEATEKLRFTLSASNTFKEIDVIDVSGPPEYASRVSRYADGSNTITQANEGDTVYLVLETKYVANGTEFTFTSSSDSDISNIVEFGTPRNINNNLIIVPVTLEADPTKPYEGTETITLEVRRLGAVVTSTALIIIDTAWKAETWYSTNPNGTDIITQSDEGKTVYLILRVPSGTLINTYFKPTIKSVSTTGEIVEGQDVDITNSTMVAKQYTGNMILAQKIEIIADKKTEGDELLLMEWVNQTTSQVVGDSNKQLLVKDTSLTPVMNMYLSGSNLTDVDLKSLFEAQFGTQDVAWICNLYITGECWFTASSTLGAALRNVNWLAGTEMNIFWNSTGGVVGKGGKGASPGLSQVGANGGPCIEVGSGLTLNLNISTSDCIIASGGGGGGGVAVNGKNIGGGGGASTGAAGTGDYNGVVATRTIGGDGGSYSYTDPGTSVTTVFNGGKGGDAGLSGSVATGSGSNTAAGTYGNIKSGSGTLVIKKNGSLITSSQYYNENSYIRGGW
Physico‐chemical
properties
protein length:935 AA
molecular weight: 98799,25560 Da
isoelectric point:4,62831
aromaticity:0,07914
hydropathy:-0,08332

Domains

Domains [InterPro]
DC_1103
STR
1–711
DC_1103
IPR007932
RBD
690–912
IPR007932
IPR007932
RBD
704–912
IPR007932
AXF41504.1
1 935
Architecture
STR
RBD
STR 1-711 | RBD 712-912 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AXF41504.1
1 935
Domain Start End Length (AA) Confidence
N-terminal 1 695 695 0,6634
Central domain 696 903 209 0,7090
C-terminal 904 935 31 0,6015
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-695
Central
696-903
C-terminal
904-935

Taxonomy

  Name Taxonomy ID Lineage
Phage Acinetobacter phage SH-Ab 15599
[NCBI] 		2202135 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Acinetobacter baumannii
[NCBI] 		470 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Moraxellales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AXF41504.1 [NCBI]
Genbank nucleotide accession
MH517022 [NCBI]
CDS location
range 99959 -> 102766
strand -
CDS
ATGTCTGATAATAATGTAGCAACCCAGTTCCCTCAGGGTATTCAAGCCCCGAATATTTCTGGGTTGGGATATATGTCTTTTGACAAAAACATGACGATTGATACAACTCCCTCTCCTATTGTTGTTACAAGAAAGGACGGGGAATACAACGTATTGATTGACGAGGGGGAATTGATTAATGGATTCTACATTATTGATTTCTCTATGAACAGAAAGCGTTTCAATCTTGTCGTAGCAGTTAGTGGTCAAGGTAGAAATACGGGCGCGGCTATCGATAACAGTGTGAATATCATTAGCGTTCTGAATGAAGATCCATCTTTATTCAAATTTAAAGAATTATCATTGGCGCAAAAGATTGGTACCACTTCAGTAGGTATCATTCTGACCATGACTGCTATCAGCACAGTTTATGATGCAGCATCTGTTGAAATTACTGGTCTCAGTACTCAAGGTCGTTTATCGCCGTCAACAAATTACAATTTGTTTGAGCGTACCGTTGTACAACGCAAATACGGGTATGTTAACAGCGTTGAAGTGAAAGATGATGCAGCTGGGGTCAATGTAGACTTGAACTCAATTTCATTCTCATCTATCGTTTATTGTAATCCAGCTACTCCTGGCTCTAGACCTAATGCGAATGGTAAAGGCGTTTGTCAAACAATTGCAGGAACATATAACGCCTCAATGGGAGCGCAAATGTTCATCTCAGAAGAAAATGAGATGTATTTCCGTTCTAAGGTCAACGGCGCTTATGGGTTCTGGACTCAAATCTATACAACTAAGATTTATCCGAAGGTTGTAGCAGCTGGGAGCGCAGTGACTACATTCAGTCCTACATCCCCATTTGATGTATCCGTTCCAGGCATTGATCTCTCAAGAGAAAGATTTGTAATTCTGACTACTCCAGAGAAAATCTCAGCTGTCTGCGGAGGCGTTGAAGTAACAAATCGGGCTAATGGATCATTTGGACTTGTTGCTAAAAATGATTCTGGTGGTAACTGGACAGGGAAGATCAACTGGACAATCATGGAATCATACTCTTCATCAGAAGAAATGACATATTCTTTACAGATGGGTATATTACAGGGTTCTGCGTTTATTGAATCTACAACTGTCAGTGAAGGACAAATGCTACGCGTTATTGTTAACGCCCCTCAAAATGCAGACGGTTCTTTATTGGCATATAACATCACTCAAGTATCGCAATCCGATATTGGTATCCCATTATCTGGGAATGTAGAAATCAGAAGTGGCAACGGTATTGTAGATATTCCTATTGTACAAGACTTTTTACCTGAAGCAACTGAGAAGTTACGTTTCACTTTGTCAGCATCTAATACTTTCAAAGAAATAGATGTTATTGATGTATCTGGCCCTCCGGAGTATGCATCAAGAGTCTCTCGCTATGCAGATGGATCAAATACCATTACCCAAGCTAATGAAGGCGATACTGTTTATTTGGTTCTTGAAACAAAATATGTAGCAAATGGTACTGAATTCACATTTACCAGTTCAAGTGACTCGGATATCAGTAACATTGTTGAATTTGGTACTCCAAGAAACATTAACAATAACTTGATTATTGTACCTGTTACATTAGAGGCTGATCCAACTAAACCATATGAAGGTACAGAAACAATCACTCTTGAAGTGAGACGTTTAGGTGCTGTTGTTACATCTACTGCTCTCATCATTATTGACACTGCTTGGAAGGCTGAAACTTGGTATTCAACTAATCCAAATGGGACGGATATCATCACTCAATCTGATGAAGGTAAAACAGTTTATTTGATCCTAAGAGTACCGTCTGGAACGCTTATCAATACCTATTTCAAACCTACAATTAAATCAGTATCTACAACAGGTGAAATCGTAGAAGGACAAGATGTTGATATCACTAACAGTACAATGGTCGCTAAACAATATACAGGCAATATGATTCTTGCTCAAAAGATTGAAATCATTGCTGATAAGAAGACTGAAGGAGATGAATTGTTATTGATGGAATGGGTCAACCAAACTACATCTCAAGTTGTAGGAGATTCAAACAAACAATTACTGGTGAAAGATACCTCTTTGACACCTGTGATGAATATGTATCTCTCTGGTTCAAACCTTACAGATGTTGATCTCAAGTCGTTGTTTGAAGCCCAATTTGGCACTCAAGACGTTGCTTGGATTTGTAACTTGTACATTACTGGAGAGTGTTGGTTCACAGCGTCTTCTACTCTGGGCGCTGCTCTGAGAAATGTTAACTGGTTAGCTGGTACAGAAATGAACATTTTCTGGAACAGTACTGGCGGCGTTGTAGGTAAAGGTGGTAAGGGTGCATCTCCTGGTCTTTCTCAAGTAGGAGCAAACGGTGGGCCATGTATTGAAGTAGGTTCTGGTCTTACTCTGAACTTGAACATCTCTACCTCCGATTGTATCATTGCATCAGGCGGCGGCGGCGGCGGCGGTGTAGCTGTTAATGGAAAGAACATTGGCGGGGGCGGTGGCGCTTCTACAGGTGCAGCTGGTACAGGCGATTACAATGGTGTTGTTGCAACTAGAACAATCGGTGGAGATGGCGGTTCATATTCTTATACTGACCCAGGCACTTCTGTAACTACTGTATTCAACGGTGGTAAAGGTGGTGATGCAGGTCTATCGGGTTCTGTTGCAACAGGTTCTGGTTCTAATACGGCGGCTGGAACATACGGTAATATCAAATCTGGTTCCGGAACTCTTGTTATCAAGAAGAATGGCAGCTTGATCACATCATCTCAGTACTACAATGAAAACTCCTATATACGGGGTGGATGGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
d6c5267a9758fca974e91cc09f1c33a3ee1b2798fe85928319043e2daf7e5568
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2939
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization and genome sequencing of SH-Ab 15599, a novel bacteriophage targeting carbapenem-resistant Acinetobacter baumannii Ji,J., Wang,R., Luo,T., Xu,M., Guo,X., Hu,F., Li,M. and He,P. 2011-05-01 — GenBank