Protein

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Genbank accession
YP_010066408.1 [GenBank]
Protein name
hinge connector of long tail fiber protein distal connector
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,85
TF
Evidence RBPdetect2
Probability 0,78
Protein sequence
MADLKVGSTTGGSVIWHQGNFPLNPAGDDVLYKSFKIYSEYNKPQAADNDFVSKANGGTYLNKVIFNKGMTVPGAGSGDNGIFAGPGDNATYDTTNMDIVSWYGIGFKSSQGSAGRTVVINTRNGDISSKGVIEASQIRATSLSPVNNYDLTRKDYVDGAINIVTANANSRVLRSGDTMTGNLTAPNLFSQNPASQPSHVPRFDQIVIKDSVQDFGYY
Physico‐chemical
properties
protein length:218 AA
molecular weight: 23281,45170 Da
isoelectric point:6,06992
aromaticity:0,09633
hydropathy:-0,37982

Domains

Domains [InterPro]
DC_0466
STR
1–216
DC_0466
IPR005601
STR
56–192
IPR005601
YP_010066408.1
1 218
Architecture
STR
STR 1-216 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_010066408.1
1 218
Domain Start End Length (AA) Confidence
N-terminal 1 86 86 0,6670
Central domain 87 207 122 0,2410
C-terminal 208 218 10 0,8990
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-86
Central
87-207
C-terminal
208-218

Taxonomy

  Name Taxonomy ID Lineage
Phage Enterobacteria phage vB_EcoM_IME340
[NCBI] 		2163890 Uroviricota > Caudoviricetes > Pantevenvirales > Tevenvirinae > Tequatrovirus
Host Escherichia coli BL21(DE3)
[NCBI] 		469008 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Escherichia

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010066408.1 [NCBI]
Genbank nucleotide accession
NC_054904 [NCBI]
CDS location
range 15194 -> 15850
strand -
CDS
ATGGCTGATTTAAAAGTAGGTTCAACAACTGGAGGCTCTGTCATTTGGCATCAAGGAAATTTTCCATTGAATCCAGCCGGTGACGATGTACTCTATAAATCATTTAAAATATATTCAGAATATAATAAGCCACAAGCTGCTGATAACGATTTCGTTTCTAAAGCTAACGGTGGTACGTATTTAAATAAAGTAATTTTTAATAAAGGAATGACTGTTCCTGGTGCAGGGTCAGGTGACAACGGTATTTTTGCTGGTCCTGGTGATAATGCCACATATGATACTACAAATATGGATATTGTTTCGTGGTATGGTATTGGTTTTAAATCATCACAGGGTTCAGCGGGTAGAACTGTAGTAATTAACACGCGAAATGGAGATATTAGCTCAAAGGGTGTAATTGAAGCATCACAAATACGCGCAACTTCATTATCTCCAGTAAATAATTATGACCTTACACGGAAAGATTATGTTGATGGAGCAATAAATATTGTTACAGCAAACGCAAACTCTAGGGTATTACGCTCTGGAGATACTATGACAGGAAATTTAACTGCGCCAAACCTTTTTTCGCAGAATCCTGCATCTCAACCTTCACATGTTCCACGATTTGATCAAATTGTTATTAAGGATTCTGTTCAAGATTTCGGCTATTATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
a1c16d52570f0024870712b3f8f292a28f7b29acde6ea66f675c3dc230d8660d
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6971
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence analysis of Enterobacteria phage IME340 Li,P., Wang,J. and Tong,Y. 2016-02-25 — GenBank