Protein

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Genbank accession
QIN99433.1 [GenBank]
Protein name
putative tail protein
RBP type
TSP
Evidence RBPdetect
Probability 0,84
Protein sequence
MISNNAPAKMVLNSIMTGYTMAYIQHSIYTDYDVIGRSFWLKLGEEVDRRDFTGIDTFFVMINNLTPSTTYQVQGAFYDSIIDSELLNAKIGINLSNETNFKTKEKPIIVAARSESEPVDVGVGAPIVVVETTGEASYCTIELKSTATEDSSWTKYYIGALGSTIKFGGVPIGDYKIRISGQVTMPDGVTVDSSGYYEFPNIITVAYNFVPPTAPIDIVFKAARIADGKERYDVRIEWDWERGAGANVREFLVTYINSEEYAKTGWAKAQKINVGAARAATIISFPWKVEHTFKVSSIAWGPNKQDITESAPVTFILNEDTPLDNSFVNETGIDVNYAFIKGSMKDGEIWRQTFLIDAATGAINIGLLDREGKAPISFDPINRVVNVDGKVITRDINAANFIMTNLSGKDNPAIYTQGKSWGDNNSGIWMGMDNTSAKAKLDIGNATQWIRYDGTTLRISSGVVIGTPNGDVDIGTGLQGKQTVFVYKLATSLPTKPLEQDYPPPGWSKTPPNRTDMTQNIYATTGTLDPVTNKLLEGTSWSDVVQWSGTEGTIGHDGQRGPGMYSMGIPGLGGWDDGQANAFFQNNFGKPPVKYDVLTQYNSNAPQTAFTRQWNGSGWINPAMVLHGNMIVNGTVTADKIVAGNAFLSQIGVNIIYDRNAALSGNPEAYYKMKIDLNSGYIHIR
Physico‐chemical
properties
protein length:685 AA
molecular weight: 74976,48760 Da
isoelectric point:5,05579
aromaticity:0,10365
hydropathy:-0,23985

Domains

Domains [InterPro]
IPR057550
STR
10–97
IPR057550 IPR057551 IPR057552 IPR057549
IPR057551
STR
103–197
IPR057551
QIN99433.1
1 685
Architecture
STR
STR
STR
STR
STR 10-97 | STR 103-197 | STR 211-335 | STR 350-664 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QIN99433.1
1 685
Domain Start End Length (AA) Confidence
N-terminal 1 408 408 0,8867
Central domain 409 617 210 0,1630
C-terminal 618 685 67 0,4928
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-408
Central
409-617
C-terminal
618-685

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage bombadil
[NCBI] 		2713285 Uroviricota > Caudoviricetes > Demerecviridae > Epseptimavirus > Epseptimavirus bombadil
Host Salmonella enteritidis
[NCBI] 		149539 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QIN99433.1 [NCBI]
Genbank nucleotide accession
MT074449 [NCBI]
CDS location
range 29583 -> 31640
strand +
CDS
ATGATTTCTAATAATGCACCAGCCAAGATGGTCTTAAATAGTATTATGACTGGGTATACGATGGCGTATATCCAGCATTCTATCTATACCGACTACGATGTTATCGGTAGATCATTCTGGCTTAAACTTGGCGAAGAAGTGGATAGAAGAGATTTCACTGGGATCGACACTTTCTTTGTTATGATCAATAATTTAACTCCCTCAACTACCTATCAGGTTCAGGGAGCTTTTTATGACTCAATTATTGACTCAGAACTTTTAAATGCAAAAATTGGTATTAACCTCTCTAATGAAACTAACTTTAAAACAAAAGAGAAGCCAATAATTGTTGCAGCAAGATCTGAGTCAGAACCTGTGGATGTTGGGGTGGGAGCACCAATAGTTGTTGTGGAAACAACTGGTGAAGCAAGCTACTGTACTATTGAGTTAAAAAGTACAGCCACTGAAGACAGTTCATGGACTAAATATTATATTGGGGCTTTAGGTTCTACTATTAAATTTGGCGGAGTTCCTATCGGAGATTATAAGATCAGAATATCTGGTCAAGTAACTATGCCTGATGGTGTTACAGTTGATTCTTCTGGGTACTATGAGTTCCCTAATATTATAACTGTAGCTTATAATTTTGTTCCTCCTACTGCACCTATCGATATTGTTTTTAAAGCTGCACGAATTGCTGATGGTAAAGAACGATATGATGTTAGAATTGAGTGGGACTGGGAACGTGGTGCTGGTGCTAACGTTCGTGAATTCTTGGTTACTTACATAAACTCCGAGGAATACGCTAAAACCGGATGGGCTAAAGCTCAAAAGATAAACGTGGGTGCTGCTAGAGCTGCAACGATTATATCATTCCCATGGAAAGTTGAACATACCTTTAAGGTTTCATCAATTGCCTGGGGACCAAACAAACAAGATATAACAGAATCAGCTCCTGTAACATTTATTCTGAATGAAGATACTCCTCTAGATAATAGTTTTGTCAATGAGACGGGTATTGATGTTAACTATGCCTTTATTAAGGGTAGTATGAAAGATGGGGAAATATGGAGACAAACATTCCTAATTGATGCAGCTACTGGTGCTATTAACATTGGTCTGCTAGATAGAGAAGGTAAAGCACCTATTTCTTTCGACCCTATAAACCGTGTTGTTAACGTTGATGGTAAAGTAATCACTAGAGATATTAATGCTGCAAACTTTATTATGACTAACTTGTCTGGTAAAGATAATCCAGCAATTTACACTCAAGGTAAATCTTGGGGAGATAATAACTCTGGTATTTGGATGGGCATGGATAATACCTCTGCCAAAGCTAAATTAGATATTGGTAATGCTACACAATGGATACGTTATGATGGTACTACCCTACGTATTTCTAGTGGTGTAGTAATTGGAACACCAAATGGTGACGTAGATATTGGTACTGGATTACAGGGTAAACAAACAGTATTTGTTTATAAGTTAGCAACATCTCTACCCACCAAACCGCTAGAACAAGATTATCCACCTCCTGGTTGGTCAAAAACTCCACCTAACCGTACAGATATGACACAAAATATCTATGCGACCACAGGTACACTTGATCCAGTTACTAACAAACTTCTTGAAGGCACTAGCTGGTCTGATGTGGTTCAGTGGAGCGGTACTGAAGGTACTATAGGACATGATGGACAGCGTGGTCCTGGGATGTACTCCATGGGTATTCCTGGATTAGGTGGTTGGGATGATGGACAGGCTAATGCATTCTTCCAAAATAACTTTGGAAAACCTCCAGTTAAATACGATGTCTTAACACAATATAACAGTAATGCTCCACAAACAGCATTTACCCGCCAATGGAACGGGTCTGGATGGATTAACCCTGCAATGGTTCTTCATGGAAACATGATTGTTAATGGAACTGTAACTGCGGATAAGATTGTGGCAGGAAATGCCTTCTTATCACAAATAGGTGTTAATATAATCTACGATAGAAATGCTGCGTTATCAGGGAACCCTGAAGCATACTACAAGATGAAGATAGACCTAAATAGTGGGTATATCCATATAAGGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
d556642a90b5b30d7bee90662888ad9023cc829e3cd87b2e53983503b6cfa532
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7899
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50