Protein

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Genbank accession
XAO41147.1 [GenBank]
Protein name
structural protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MANEIGTATNFEDFFSKIVAFLTTNATLVTAGQAWQALRVRRDNIDTYTTSLPDSFTGNGRKQIHTFRYDPRSLNTNNPAQNGSESFWYTNSGFSAGSSYGQWKLRQAREVKTVRIKAPIGSSYASYAPKSFRLQYSDDGTAWTTALTVSNAPNWSAGERRDFAVPGTPGSHLYWKIIWDATQVVSYIGWQELLLLEADGTVANHFGSEVILKALGNSGLDEIYTGIRAEYDSAAGWYNLFMNGYTGYDANEPSWFNQPGALPGYGAQYTRATPMVPLWNTTMPYWMVASGRSFRFCIKVGTNYEGGYLGFILPYATPNQYPYPLAVGGSLCPINDTSRSAEWRYSYVSYAHGVYPGPGTQNYPESEANWATLYLRSPEGAWNYHGNRSSYASSNSEGVGGPTVSSSPPYNININNAGLRNVWPHCMNGQWSSGLRPYRECLGGGYILQPCVLIQRSPAQVLGELEGTFAISGYQNSAENTTVFNGKTHVVFQNAYRNTIHEHWALSMD
Physico‐chemical
properties
protein length:509 AA
molecular weight: 56398,77400 Da
isoelectric point:6,51599
aromaticity:0,14145
hydropathy:-0,43084

Domains

Domains [InterPro]
DC_0072
STR
1–509
DC_0072
G3DSA:2.60.120.260
STR
72–187
G3DSA:2.60.120.260
PF22633
RBD
82–163
PF22633
IPR008979
STR
82–152
IPR008979
XAO41147.1
1 509
Architecture
STR
STR 1-509
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XAO41147.1
1 509
Domain Start End Length (AA) Confidence
N-terminal 1 38 38 0,1548
Central domain 39 237 200 0,6897
C-terminal 238 509 271 0,9659
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-38
Central
39-237
C-terminal
238-509

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage vB_Pae_HLL23
[NCBI] 		3144833 No lineage information
Host Pseudomonas aeruginosa
[NCBI] 		287 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XAO41147.1 [NCBI]
Genbank nucleotide accession
PP760143 [NCBI]
CDS location
range 45251 -> 46780
strand -
CDS
ATGGCAAACGAAATCGGAACCGCGACGAACTTTGAGGACTTCTTCAGCAAGATCGTCGCCTTTCTTACCACGAACGCGACCCTGGTGACGGCAGGTCAGGCTTGGCAGGCGCTGCGCGTCCGCCGGGACAACATCGACACGTACACCACCAGCCTCCCGGACTCCTTCACGGGTAACGGTCGGAAACAAATCCACACCTTCCGCTATGATCCGCGGTCGCTGAACACGAACAATCCCGCCCAGAACGGTTCGGAGTCCTTCTGGTACACCAACTCAGGCTTCTCCGCCGGGAGCAGCTACGGTCAATGGAAACTGCGACAGGCGCGCGAAGTCAAGACCGTGCGCATCAAGGCCCCCATCGGGTCCAGCTACGCAAGCTATGCCCCCAAGTCCTTCCGGCTCCAATACTCGGATGACGGAACCGCCTGGACTACGGCCCTGACCGTCTCGAACGCGCCGAACTGGTCCGCCGGGGAGCGCCGGGACTTCGCCGTGCCCGGCACTCCCGGTTCGCACCTGTATTGGAAGATCATCTGGGACGCGACTCAGGTGGTGAGCTACATCGGGTGGCAGGAACTCCTCCTGCTCGAAGCGGACGGGACGGTTGCCAACCACTTTGGGTCGGAGGTCATCCTAAAGGCCCTGGGCAACTCGGGTCTGGACGAAATCTACACCGGCATCCGGGCGGAGTACGACAGCGCAGCGGGTTGGTACAACCTGTTCATGAACGGATACACGGGCTATGACGCCAACGAGCCTTCCTGGTTCAATCAACCGGGAGCCCTCCCGGGCTACGGGGCGCAATACACTCGGGCAACCCCGATGGTCCCGCTGTGGAACACCACCATGCCGTACTGGATGGTGGCTTCGGGCCGCTCCTTCCGGTTCTGTATCAAGGTCGGCACGAACTATGAGGGAGGCTATCTTGGTTTCATCCTCCCGTATGCTACGCCCAATCAATACCCGTACCCGCTCGCTGTCGGTGGTTCCCTCTGCCCCATCAACGACACCTCCCGGTCTGCGGAGTGGCGTTATTCATACGTGAGCTACGCCCACGGCGTGTATCCAGGGCCGGGCACTCAGAACTACCCGGAAAGCGAAGCAAACTGGGCAACCCTTTACCTGCGCAGCCCGGAAGGAGCGTGGAACTACCACGGCAACCGTTCATCCTATGCTTCGTCCAACAGCGAGGGCGTAGGGGGTCCGACCGTTAGCAGCTCGCCTCCCTACAACATCAACATTAACAACGCCGGTTTGCGCAACGTCTGGCCTCACTGCATGAACGGCCAGTGGTCCTCGGGCCTGCGCCCCTACCGCGAGTGCTTGGGCGGCGGGTATATTCTCCAGCCTTGCGTGCTGATTCAGCGGTCGCCTGCCCAAGTCCTCGGGGAGCTGGAGGGGACGTTTGCAATCAGCGGGTACCAAAACAGCGCGGAGAACACGACCGTGTTCAACGGCAAGACTCACGTGGTGTTCCAGAATGCTTACCGCAACACGATCCACGAGCACTGGGCGCTGTCGATGGATTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
0bcc860c7150f95bd492039a08cb83176386d4082e7444553012f0884209d6d7
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6356
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and Genomics of a Novel Carbapenem-resistant Pseudomonas phage vB_Pae_HLL23 Huang,C. 2024-06 — GenBank