Protein

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Genbank accession
XKI62139.1 [GenBank]
Protein name
tail protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,60
Protein sequence
MALISQSIKNLKGGISQQPDILRYPDQGSQQVNGWSSESEGLQKRPPMVFLKTLGGSDALGSAPYIHLINRDESEQYYAVFTGTGIRVFDLAGNEKQVRYTTDGSTYINTNNPRNDLRMVTVADYTFIVNRNVRVTRDINSVNLAGFNPKQDALINVRGGQYGRTLQIIINGNTQATYQIPDGSQPEHVGNTDAQWLAEELARQCRVSAPGWTFDVGQGYIHIKAPEGQQIDSLVTKDGYADQLINPVTHYAQSFSKLPTNAPEGYMVKIVGDASKSADQYYVRYDTTRKVWSETLGWNVNDQLLFETMPHALVRAADGNFEFKRIEWSPKTCGDDDTNPWPSFMDSTINDVFFFRNRLGFLSGENIILSRTAKYFNFYPASIANLSDDDPIDVAVSTNRIAILKYAVPFSEELLIWSDEAQFVLTASGTLTSRSIELNLTTQFDVQDRARPFGIGRNVYFASPRSSFTSIHRYYAVQDVSSVKNAEDITAHVQNYIPNGVFDICGSSTENFCAVLSQGDPSKIFMYKFLYLNEELRQQSWSHWDFGSNVQVLACQSINSDMYVILRNEFNTFLTRVSFTKSTTDLQGEPYRAFMDMKIRYTIPNGTYNDDTFTTTLHLPTIYGADFANGKITVLETDGKITEFEKPEVGWKNDPELRLNGNLEGRVVYVGFNIDFVYEFSKFLIKQVDNDGSTSTEDIGRLQLRRAWVNYEDSGTFDIYVENQSSNWKYTMAGARLGSHTMRTGKLNLGTGQYRFPVVGNAKFNTVSILSDATTPLNIIGCGWEGNYLRRSSGV
Physico‐chemical
properties
protein length:795 AA
molecular weight: 89459,80680 Da
isoelectric point:5,27576
aromaticity:0,11698
hydropathy:-0,39799

Domains

Domains [InterPro]
IPR058003
TTP
1–794
IPR058003
XKI62139.1
1 795
Architecture
TTP
TTP 1-794 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XKI62139.1
1 795
Domain Start End Length (AA) Confidence
N-terminal 1 143 143 0,9909
Central domain 144 349 207 0,1694
C-terminal 350 795 445 0,2063
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-143
Central
144-349
C-terminal
350-795

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage CHRF_10027
[NCBI] 		3377760 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella enterica subsp. enterica serovar Typhi
[NCBI] 		90370 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Salmonella

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XKI62139.1 [NCBI]
Genbank nucleotide accession
PQ336905 [NCBI]
CDS location
range 18683 -> 21070
strand -
CDS
ATGGCACTCATTAGTCAATCAATCAAGAACTTGAAGGGTGGTATCAGTCAGCAGCCAGACATCCTTCGGTATCCAGACCAAGGGTCACAACAGGTTAACGGTTGGTCTTCGGAGTCCGAGGGTCTCCAAAAGCGGCCACCTATGGTTTTCCTTAAGACCCTGGGAGGGAGTGATGCCTTAGGATCAGCGCCATACATCCATCTGATTAACCGGGATGAAAGCGAGCAGTATTATGCTGTGTTCACCGGAACAGGTATCCGTGTGTTTGACCTTGCTGGGAACGAAAAGCAGGTACGTTATACCACTGACGGTTCCACATACATCAATACGAACAACCCACGGAATGACCTAAGGATGGTCACTGTGGCAGACTATACATTCATCGTCAACAGGAACGTGCGTGTCACACGAGATATCAACTCAGTGAACCTCGCAGGGTTTAACCCGAAGCAGGACGCTTTGATAAACGTTCGTGGAGGTCAATATGGCCGCACCTTGCAGATCATTATTAACGGCAACACACAAGCAACCTATCAGATTCCTGATGGCTCTCAGCCAGAACATGTGGGCAATACGGACGCTCAGTGGCTAGCGGAAGAGTTAGCCCGTCAGTGCCGAGTAAGCGCACCAGGATGGACTTTCGATGTAGGTCAAGGGTACATCCATATTAAGGCCCCTGAAGGTCAACAGATTGATTCCTTGGTGACTAAGGATGGGTACGCTGACCAGCTGATTAACCCTGTCACCCACTACGCTCAGTCATTCTCTAAGTTGCCTACTAACGCCCCTGAGGGGTACATGGTGAAGATCGTAGGGGACGCCTCTAAGTCTGCCGACCAGTATTACGTTCGGTATGACACTACGCGTAAAGTGTGGTCTGAGACATTGGGGTGGAACGTTAATGACCAACTTCTGTTTGAGACAATGCCACATGCGCTTGTGCGTGCTGCCGATGGCAACTTTGAGTTCAAGCGGATTGAGTGGAGTCCTAAGACTTGTGGTGATGACGATACTAACCCATGGCCTTCCTTCATGGATTCCACAATCAACGATGTGTTCTTCTTCCGTAACCGTTTAGGTTTCCTTAGTGGGGAGAATATCATTCTGAGTAGAACCGCCAAGTACTTTAACTTCTACCCGGCGTCCATAGCAAATCTGAGCGACGACGACCCTATAGATGTGGCTGTGAGCACCAACCGGATAGCAATCCTGAAGTACGCCGTTCCGTTCTCAGAAGAGCTACTCATCTGGTCAGACGAAGCACAATTCGTCCTGACAGCGTCAGGTACTCTCACGTCACGCTCCATTGAGTTGAACCTGACGACTCAGTTTGATGTACAGGACCGAGCGAGGCCGTTTGGTATTGGCCGCAACGTTTACTTTGCAAGCCCAAGGTCAAGCTTTACGTCTATCCATCGATACTACGCTGTGCAGGATGTAAGTTCCGTTAAGAATGCCGAGGACATTACAGCGCACGTCCAGAACTATATCCCTAATGGGGTGTTCGATATTTGTGGTAGCAGCACTGAAAACTTTTGTGCAGTTCTCTCTCAGGGGGACCCGAGTAAAATATTCATGTACAAATTCCTGTACCTGAACGAAGAGTTGAGACAACAGTCCTGGTCCCATTGGGACTTTGGGTCAAACGTGCAGGTGTTAGCCTGTCAATCCATCAACTCGGATATGTATGTGATTCTCCGCAATGAGTTCAATACATTCCTCACGAGAGTGTCGTTCACGAAGAGTACCACTGACTTGCAAGGTGAGCCGTACCGAGCCTTTATGGACATGAAGATTCGCTACACGATACCTAACGGAACGTATAATGATGACACCTTCACAACCACTCTTCACCTACCTACTATCTACGGTGCAGACTTTGCAAATGGTAAGATTACCGTTCTGGAGACTGATGGGAAGATTACCGAGTTTGAGAAACCCGAGGTCGGCTGGAAGAATGACCCCGAGCTTAGACTTAACGGTAACTTAGAGGGTCGCGTAGTGTACGTAGGGTTCAACATTGACTTCGTTTATGAGTTCTCTAAGTTTCTCATCAAGCAAGTTGATAACGACGGGTCCACATCTACGGAAGACATAGGCCGCTTGCAATTACGGAGGGCGTGGGTGAACTATGAGGATTCTGGAACGTTCGATATTTATGTTGAGAACCAATCGTCCAACTGGAAGTATACAATGGCAGGTGCTCGCTTGGGCTCTCACACCATGAGGACTGGGAAGCTGAACTTAGGGACCGGACAATATCGATTCCCTGTGGTCGGTAACGCTAAGTTCAATACGGTGTCCATCTTGTCCGATGCGACTACCCCTCTGAACATCATTGGGTGTGGCTGGGAAGGGAACTACTTACGGAGAAGTTCTGGTGTCTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
c4bf28870abd3323db7d3f8aadaf0172ab23ede6ddc2afd43222bfa6e0b3f23f
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3153
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genome sequences of bacteriophages that infect Salmonella Typhi from Bangladesh Islam,S., Kabiraj,R., Sarkar,H., Dev,P.C., Tanni,A.A., Keya,D.P., Malakar,A.R., Tanmoy,A.M., Saha,S.K., Hooda,Y. and Saha,S. — — GenBank