Protein

View in Explore
Genbank accession
QBX23415.1 [GenBank]
Protein name
tail fibers protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,51
TF
Evidence RBPdetect2
Probability 0,81
Protein sequence
MLITIHNAKLEKVAYIDNDKQDTLNYYDDKFSQYLNTANSTFEFTVYKRGIKSDTVKEKAYLTLTERSFVSFRYNGKSYLFNVMTTDETDTEIYCYCENLNLELLNEYAGPYKATTQMSFVDYCNLFGTLRFGAITVGINEVADQKRTIEWTGQDTNLKRLLSIANNFDAEIEFVTHLKNDSSLKSFVMNIYKKNDATHQGVGRRRDDIILQYGKNVESVRRKIDKTGIYNAIRPSGKTTVTTTTSKQGSVQTGSVLWSGGNLTYAGHVMQSSVVNTILSLCSKYKLLPSGVFSQLYLESFWGDTPVGRADNNWGGITWTGATTRPSGIKVSQGQPRAEGGYYNHYASVDDYLKDYAYLLAEQGIYAVKGKLTIDDYTKGLFRVGGATYDYAAAGYVHYAPLMRDIRGGINRNNNGAMDNVDNQFKNGGSTSQNTTQIAAKTKAVLAEANGLKGQRVGSGQCYALAAWYAMKLDGPGLNGGVTSFRGLIGAGAAAAQIGTDYNWAQFGWKSFAPSKVSELAAGSIVNIRANSGAPVYTGGWGHTVIVKSLSGDTLTVLEQNFNNVQVVQEHTYSASAYLRTVQTVCYPPELVQGKRVEGTATAEPPKDETTTTSQEKEVLINPSLYREWKNEAGQVEFYLKNSLLYAPLSKELYPSAFTGIETDDNWIRKDLDVDTESEEKLISVALADLRKHCYPAVTYEVSGFIGDLDIGDTIKINDPEYTPSLILEARVSEQHISFTDPNQNKTVFDNYRALESKISQGLIDRMSELAEAAKPYDLRLITDNGTVFTNGEGRSILTAELWKGNKKFDASYQFKRDGQLIGAGLQLAVDAKDVPSDKPLIITVEAYLNNELIASKQITFTNSLGEQGPAGRGIVSTEDYYLASPNRTGVTSATSGWTKTPQEITETNKYHWYYHIDVYSDGTRKETIPAIIGVYGDKGSDGKEGEKGDDGPIGPQGPPGALDEKQLQDINNKIDGKADQNLTIEQINKLAELQAIANAELQAKASVDALASLQKQIQSALAAMNASQKLSEQDLITASQRAIKATNDILDLKEQWNFIDNYMSASEEGLIIGSKDGTSSVRVAKDRIAFYSAGAEVASITGGMLKIDNGMFVATLQVGHFREEMYKVNGVDKHINVVKYYDTIVG
Physico‐chemical
properties
protein length:1147 AA
molecular weight: 126215,70440 Da
isoelectric point:5,42559
aromaticity:0,09503
hydropathy:-0,40820

Domains

Domains [InterPro]
DC_0558
ATT
1–400
DC_0558 IPR007921 Coil
IPR010572
ENZ
145–249
IPR010572 IPR002901 G3DSA:3.90.1720.60
G3DSA:1.10.530.10
RBD
271–398
G3DSA:1.10.530.10 IPR007921
IPR002901
ENZ
279–389
IPR002901 DC_0921
QBX23415.1
1 1147
Architecture
ATT
STR
ATT 1-400 | STR 401-1147
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QBX23415.1
1 1147
Domain Start End Length (AA) Confidence
N-terminal 1 271 271 0,9597
Central domain 272 486 216 0,6128
C-terminal 487 1147 660 0,0291
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-271
Central
272-486
C-terminal
487-1147

Taxonomy

  Name Taxonomy ID Lineage
Phage Streptococcus phage Javan128
[NCBI] 		2547993 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Streptococcus dysgalactiae
[NCBI] 		1334 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Lactobacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QBX23415.1 [NCBI]
Genbank nucleotide accession
MK448849.1 [NCBI]
CDS location
range 26975 -> 30418
strand +
CDS
ATGCTTATAACAATCCATAATGCAAAATTGGAAAAAGTTGCTTATATTGATAACGATAAGCAAGACACCTTAAATTATTATGACGACAAATTTTCTCAGTATCTAAACACGGCTAATTCAACGTTTGAATTTACGGTTTATAAGCGAGGCATTAAGTCTGACACAGTCAAAGAAAAGGCCTATCTGACATTGACAGAAAGGTCTTTTGTGTCGTTTAGATATAATGGCAAGTCTTATCTGTTTAACGTCATGACAACAGACGAAACAGACACAGAGATATATTGCTACTGCGAAAACCTCAATCTTGAATTGCTCAACGAGTACGCAGGACCATATAAAGCCACAACTCAAATGTCCTTTGTTGACTATTGCAACTTGTTTGGGACTTTACGCTTTGGTGCGATTACCGTTGGCATTAATGAGGTTGCAGACCAAAAACGCACAATTGAATGGACTGGTCAAGATACTAATCTTAAACGGTTACTATCTATTGCTAATAATTTTGACGCTGAAATCGAGTTTGTGACACATCTTAAAAACGATTCTAGTCTTAAATCGTTTGTCATGAATATTTACAAAAAAAATGACGCAACACATCAAGGGGTTGGTCGCAGACGAGATGACATTATTTTGCAGTACGGCAAAAATGTCGAGAGTGTCAGACGTAAGATTGATAAAACAGGCATTTACAATGCTATCAGGCCAAGTGGAAAAACCACTGTCACAACGACTACAAGCAAACAAGGCTCTGTGCAAACGGGGTCTGTTTTGTGGTCGGGTGGTAATTTGACTTATGCAGGTCATGTGATGCAATCATCTGTTGTTAATACCATTTTAAGCCTATGCAGTAAATACAAGCTGTTACCGTCCGGTGTTTTTAGCCAGCTGTACCTCGAATCATTTTGGGGAGATACCCCAGTAGGTCGTGCTGATAATAATTGGGGCGGCATTACTTGGACTGGTGCAACAACTAGACCAAGCGGAATTAAGGTTTCCCAAGGTCAGCCTCGAGCCGAGGGTGGATATTATAACCATTACGCAAGTGTTGATGACTACTTAAAAGATTACGCTTACCTCTTAGCCGAGCAAGGCATTTATGCCGTCAAAGGTAAGCTAACCATTGATGATTATACTAAAGGTCTATTTAGAGTTGGTGGCGCAACTTACGACTATGCAGCAGCTGGTTATGTTCACTACGCACCTCTCATGAGAGACATCAGAGGTGGGATTAACCGTAATAATAACGGCGCTATGGATAACGTCGATAACCAATTTAAAAATGGTGGCTCGACTAGTCAAAACACTACTCAGATAGCTGCTAAAACAAAAGCGGTACTTGCGGAAGCGAACGGTCTGAAAGGTCAGCGAGTGGGCTCCGGTCAGTGTTATGCCTTAGCTGCTTGGTACGCAATGAAATTAGATGGGCCAGGTCTAAATGGTGGTGTAACTAGTTTTAGAGGACTTATTGGTGCTGGTGCAGCAGCTGCTCAGATTGGTACGGACTACAACTGGGCTCAATTTGGTTGGAAGTCGTTTGCACCAAGCAAAGTCTCCGAATTGGCTGCTGGGTCTATCGTCAATATCAGAGCTAATTCTGGTGCTCCTGTTTACACAGGGGGCTGGGGGCATACTGTTATCGTTAAGTCGTTGTCAGGCGACACGCTCACAGTTTTAGAGCAAAACTTTAATAACGTCCAAGTCGTCCAAGAGCACACTTATAGTGCTAGTGCTTATTTAAGGACAGTCCAAACAGTATGTTATCCACCAGAACTGGTTCAAGGTAAACGTGTTGAAGGGACAGCAACCGCAGAGCCACCAAAAGACGAAACGACCACGACAAGTCAAGAAAAAGAGGTTTTAATTAACCCATCGCTTTACCGTGAATGGAAAAACGAAGCAGGACAAGTCGAATTTTACCTTAAAAACAGTTTGTTGTATGCGCCTTTATCTAAAGAGCTTTATCCGTCAGCATTTACAGGCATCGAGACAGATGACAACTGGATACGAAAAGACTTAGATGTTGACACAGAGAGCGAGGAAAAACTCATCTCTGTTGCTCTCGCAGACCTGAGAAAACATTGTTATCCAGCGGTAACCTATGAAGTGTCTGGGTTTATTGGTGATTTAGATATTGGTGACACCATCAAAATCAATGACCCAGAATACACCCCAAGCCTCATTTTAGAGGCAAGGGTTAGTGAGCAACACATCTCATTTACAGACCCCAACCAAAATAAGACTGTCTTTGATAATTACAGAGCCTTAGAGAGCAAAATCTCACAAGGGTTAATTGACCGCATGAGTGAGCTAGCGGAAGCTGCTAAACCATACGATTTGCGGTTGATCACTGACAATGGCACTGTTTTTACAAACGGCGAGGGACGCTCTATTTTAACCGCAGAGCTTTGGAAAGGTAACAAAAAGTTTGATGCAAGCTATCAATTTAAACGTGATGGTCAATTAATAGGCGCAGGATTGCAATTGGCAGTTGACGCTAAGGATGTACCGTCTGATAAACCTCTAATCATTACTGTTGAGGCTTATTTAAATAATGAGCTGATTGCAAGCAAACAGATTACGTTTACTAACTCGCTTGGCGAACAAGGCCCAGCTGGACGTGGGATTGTCTCTACAGAGGATTATTACTTAGCGTCACCAAATCGTACAGGTGTCACATCTGCAACATCTGGTTGGACTAAGACGCCTCAAGAAATTACTGAGACCAATAAATATCATTGGTATTATCACATTGACGTTTATTCCGACGGCACTCGAAAAGAGACAATCCCAGCCATCATCGGTGTCTATGGCGATAAAGGTTCAGATGGTAAGGAAGGAGAAAAAGGGGACGATGGTCCAATAGGACCACAAGGACCTCCTGGCGCTTTGGATGAAAAGCAACTGCAAGATATCAACAATAAAATTGATGGCAAAGCAGACCAGAATTTGACCATCGAGCAAATCAATAAACTTGCTGAATTGCAGGCTATTGCCAACGCTGAATTACAAGCTAAAGCAAGTGTCGATGCATTGGCCAGCTTACAAAAACAAATACAGTCTGCACTAGCAGCAATGAATGCTAGCCAAAAGTTATCTGAGCAAGACCTTATCACCGCTAGTCAACGAGCCATCAAAGCAACAAACGACATCTTAGACTTAAAAGAGCAGTGGAATTTTATTGACAATTATATGTCAGCGTCTGAAGAGGGGCTTATTATTGGGTCAAAAGATGGTACAAGTTCCGTGCGTGTCGCTAAAGACCGTATTGCTTTTTACTCAGCTGGTGCAGAGGTTGCATCGATTACTGGCGGAATGCTCAAGATTGACAATGGTATGTTTGTGGCTACTTTGCAAGTAGGACATTTCCGCGAAGAGATGTATAAAGTCAATGGTGTTGATAAACATATCAACGTTGTTAAATATTATGACACGATTGTGGGGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
ed0567335d974e35ce56b995e921871441ce1cf9b5759eac4fa42a4746b5455e
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7754
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Prophages and satellite prophages are widespread among Streptococcus species and may play a role in pneumococcal pathogenesis Rezaei Javan,R., Ramos-Sevillano,E., Akter,A., Brown,J. and Brueggemann,A.B. 2018-12-20 — GenBank