Protein

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Genbank accession
WCD43704.1 [GenBank]
Protein name
long tail fiber protein
RBP type
TSP
Evidence RBPdetect
Probability 0,64
Protein sequence
MADLKLGSTAGGSVLWHQGNFPLTPVSNDLYFKTYKIYSEYNKPQAVDNDFVSKALGGNYKANVYFEQGLTFNDSNGYGIKLGARTGGTPFTASFRIKGPFGFETETGTPFVIFDPDTTTGAKRLTVMGDTLARQIYDETGRVFSPGNTPSKAQVGLGNVTNQQQVELNNSTLQTMTGNLSAPNFFSRNPASDPAHVPRFDQIVLKDSVQDFGYY
Physico‐chemical
properties
protein length:215 AA
molecular weight: 23472,78070 Da
isoelectric point:6,09856
aromaticity:0,12558
hydropathy:-0,44140

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WCD43704.1
1 215
Domain Start End Length (AA) Confidence
N-terminal 1 193 193 0,4894
Central domain 194 204 12 0,0507
C-terminal 205 215 10 0,5649
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-193
Central
194-204
C-terminal
205-215

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage ECML-359
[NCBI] 		2910938 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WCD43704.1 [NCBI]
Genbank nucleotide accession
OL631482 [NCBI]
CDS location
range 154310 -> 154957
strand +
CDS
ATGGCAGATTTAAAACTAGGCTCAACAGCCGGAGGTTCGGTCCTCTGGCACCAGGGTAATTTCCCATTAACACCAGTCAGTAATGACTTATATTTCAAAACTTATAAAATTTATTCCGAATATAACAAGCCACAAGCAGTCGATAACGATTTTGTTTCTAAAGCTCTGGGTGGTAATTATAAAGCAAATGTGTATTTCGAACAGGGTCTGACATTTAACGATTCAAATGGTTACGGGATTAAGTTAGGAGCAAGAACAGGCGGAACACCATTTACAGCATCTTTCCGTATTAAAGGACCATTCGGATTTGAGACTGAAACGGGAACACCATTTGTTATTTTTGACCCTGATACTACGACAGGAGCAAAACGTCTTACTGTTATGGGTGATACGTTAGCTCGACAAATTTATGATGAAACAGGTCGTGTATTTTCTCCAGGGAATACTCCGTCAAAAGCTCAAGTTGGTCTTGGTAATGTAACTAACCAGCAACAGGTAGAACTAAATAATAGTACATTGCAAACAATGACAGGTAACTTGTCAGCACCTAATTTCTTCTCTAGGAACCCAGCATCAGACCCGGCCCATGTGCCTCGTTTTGACCAAATCGTTCTTAAAGACTCCGTACAAGATTTTGGATATTATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
5f221b14d848b31387a331c73bec0d9ccbd822263640f6355826c2124bee90eb
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6070
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Virulent bacteriophages provide an effective reduction of big-seven Shiga-toxin producing Escherichia coli on various foods Vikram,A., Woolston,J., Hickey,S. and Sulakvelidze,A. 2023-09 — GenBank