Protein

View in Explore
Genbank accession
QBX26067.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,86
TF
Evidence RBPdetect2
Probability 0,92
Protein sequence
MTTEKIPLRVQHKRMSASQWASSSLILLEGELGIETDTGKVKVGDGRSRFSALQYLTGPKGEKGDRGVPGETGSAVTITSTTKSNGVTTVRFSTGQSITINDGVVSFEALTPAQKASLKGDKGERGERGEAGPMPTITINSSGIWEINGRSTGVSGRGQAGATGQRGLTGPAGRNGEKGQKGDKGDRGADGAPGQNIVNQRTNQAMKYWFGSKADYDRIYNKDTNTIYDVYE
Physico‐chemical
properties
protein length:232 AA
molecular weight: 24535,86640 Da
isoelectric point:9,46404
aromaticity:0,05603
hydropathy:-0,73621

Domains

Domains [InterPro]
SSF69349
STR
8–174
SSF69349 IPR056923
IPR041352
ATT
10–47
IPR041352 IPR050149
IPR008160
STR
158–194
IPR008160
QBX26067.1
1 232
Architecture
ATT
STR
RBD
ATT 8-47 | STR 48-194 | RBD 206-231 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Streptococcus phage Javan290
[NCBI] 		2548096 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Streptococcus marmotae
[NCBI] 		1825069 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Lactobacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QBX26067.1 [NCBI]
Genbank nucleotide accession
MK448900.1 [NCBI]
CDS location
range 28235 -> 28933
strand +
CDS
ATGACAACAGAAAAAATCCCACTCAGGGTACAACACAAGCGCATGAGCGCTAGCCAATGGGCGTCTAGTAGCTTGATTCTGCTAGAAGGTGAATTGGGCATTGAGACGGACACCGGTAAGGTGAAAGTTGGGGATGGGCGCAGTCGCTTTTCTGCCTTGCAGTATCTGACGGGGCCAAAGGGTGAGAAGGGAGACAGGGGAGTTCCTGGCGAAACTGGCTCAGCTGTGACCATCACTTCTACGACAAAAAGCAATGGCGTGACGACAGTCCGATTTAGCACTGGCCAATCGATTACGATTAATGACGGAGTGGTTAGCTTCGAAGCTCTGACCCCTGCTCAGAAAGCGAGCTTAAAAGGTGACAAGGGAGAGCGGGGCGAACGTGGCGAAGCGGGTCCGATGCCTACCATCACCATCAATTCGTCTGGTATCTGGGAAATCAATGGCCGAAGCACAGGTGTCTCTGGTCGTGGTCAGGCTGGCGCAACGGGTCAACGTGGCCTAACAGGTCCAGCAGGTCGAAATGGCGAGAAAGGTCAAAAAGGCGATAAGGGAGACAGAGGGGCAGATGGTGCACCTGGTCAAAATATTGTCAACCAACGTACCAATCAAGCCATGAAATACTGGTTTGGCTCAAAGGCAGACTATGACCGCATCTACAACAAAGATACCAATACCATCTATGACGTTTACGAATAG

Genome Context

Genome Context

Tertiary structure

PDB ID
58f6505a669bf34e49a04ae99182d8f54db3bd737fe010b2dc386a7450803427
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8172
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Prophages and satellite prophages are widespread among Streptococcus species and may play a role in pneumococcal pathogenesis Rezaei Javan,R., Ramos-Sevillano,E., Akter,A., Brown,J. and Brueggemann,A.B. 2018-12-20 — GenBank