Protein

View in Explore
Genbank accession
QBX25523.1 [GenBank]
Protein name
tail fibers protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MSELAEAAKPYDLRLITDNGNVFSNGVGRSVLTAELWKSNKKINATFQFKRENSLLGAGLQLAVDATNVPEDKPLIITVEAYIGNDLIASKQITFTNSSGEQGPAGRGITSTEDYYLASPNRTGVTSATSGWTKTPQEITETNKYHWYYHVDIYSDSTRKETLPAIIGVYGEKGDQGSPGKKGDPGEKGDPGPAGALDEKQLQDINNKIDSKADAGLTIEQINKLAELQAKASVDALASMQKQIQAAIDAMNASQKLSEQDLIIAGQRAIKAQNDLLDLKEQWNFIDNYMSASEEGLIIGSKDGTSSVRVAKDRVAFYSSGAEVASITGGMLKIDNGMFVATLQVGHFREEMFKVDGVDKHMNVTKYYKTIVG
Physico‐chemical
properties
protein length:373 AA
molecular weight: 40416,82730 Da
isoelectric point:5,16885
aromaticity:0,06971
hydropathy:-0,43003

Domains

Domains [InterPro]
DC_0921
STR
1–373
DC_0921
G3DSA:1.20.5.320
STR
168–216
G3DSA:1.20.5.320
QBX25523.1
1 373
Architecture
STR
STR 1-373
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Streptococcus phage Javan262
[NCBI] 		2548079 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Streptococcus ictaluri 707-05
[NCBI] 		764299 Bacillota > Bacilli > Lactobacillales > Streptococcaceae > Streptococcus > Streptococcus ictaluri

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QBX25523.1 [NCBI]
Genbank nucleotide accession
MK448889.1 [NCBI]
CDS location
range 17438 -> 18559
strand +
CDS
ATGAGCGAGTTGGCTGAAGCTGCCAAACCTTATGATTTGAGGCTTATCACTGATAACGGCAATGTGTTTTCTAATGGCGTTGGTCGCTCGGTTTTAACTGCCGAGTTATGGAAAAGCAATAAGAAAATTAATGCTACATTCCAATTTAAACGAGAAAACTCTTTGTTAGGGGCAGGGCTTCAGTTAGCTGTTGACGCTACAAATGTCCCAGAAGACAAACCGCTTATTATCACGGTTGAAGCTTATATTGGCAATGACCTAATAGCAAGTAAGCAGATTACTTTTACAAACTCTTCGGGAGAACAAGGTCCTGCAGGTCGTGGTATTACATCAACGGAGGACTATTATTTGGCATCTCCGAATCGCACAGGAGTAACCTCAGCAACCTCTGGTTGGACTAAAACGCCACAGGAGATTACAGAGACAAACAAGTACCACTGGTATTATCACGTCGACATTTACTCAGATAGTACTCGAAAAGAGACGTTGCCTGCAATCATTGGTGTTTACGGTGAAAAGGGTGATCAAGGTTCTCCAGGCAAAAAAGGAGATCCCGGAGAAAAAGGAGATCCCGGACCTGCCGGAGCGCTAGATGAAAAACAATTACAAGATATCAATAATAAGATTGATAGCAAAGCTGACGCTGGTCTGACAATTGAGCAAATCAATAAACTAGCAGAGTTGCAGGCAAAAGCAAGTGTTGATGCACTGGCAAGTATGCAAAAGCAAATTCAGGCAGCTATTGATGCCATGAATGCCAGTCAAAAATTATCTGAGCAGGATTTAATTATTGCAGGTCAAAGGGCTATCAAAGCACAAAATGATTTGCTTGATTTAAAAGAGCAGTGGAATTTTATTGACAATTACATGTCGGCATCTGAGGAAGGTCTGATTATTGGGTCTAAAGACGGTACAAGTTCCGTGCGTGTCGCTAAAGACCGCGTCGCCTTTTACTCATCAGGTGCAGAAGTCGCATCAATCACAGGCGGTATGCTCAAAATTGATAACGGTATGTTTGTGGCGACTCTACAAGTTGGTCATTTCCGAGAGGAGATGTTCAAAGTGGATGGGGTAGACAAACACATGAATGTTACAAAATACTATAAAACGATTGTGGGGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
00dad7043f25ee0859e56983636029e6fdc4b4a90c91fec412b88863a0713023
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7945
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Prophages and satellite prophages are widespread among Streptococcus species and may play a role in pneumococcal pathogenesis Rezaei Javan,R., Ramos-Sevillano,E., Akter,A., Brown,J. and Brueggemann,A.B. 2018-12-20 — GenBank