Protein
View in Explore- Genbank accession
- XGU09887.1 [GenBank]
- Protein name
- non-contractile tail tubular protein
- RBP type
-
TSP
- Protein sequence
-
MENFIVVNSAGAYNRMYIYKFLFRDGVQLQASWSHWEFEPGEKVLASAAIGSTIFIVKQSPQGVDIEHLRFIKEATDMDNEPYRLHLDSKATMYIQPNTYNPDTFVTLVDIGAAYGGSAPPKGNYFMVDDQGAYVSLGLLDGQSLVNIRGDWSNKTVFIGRSYNMRYKFSRFLIKSENDTGVQTEDTGRLQLRRAWVNYQDTGALRLTVSNGQREFVNILNGYTLGQQALGTSNIGDGQFRFAMNGNAMTTSLVLESDYPTPVSIVGCGWGIIRQESATSLTY
- Physico‐chemical
properties -
protein length: 283 AA molecular weight: 31624,16910 Da isoelectric point: 5,45077 aromaticity: 0,12014 hydropathy: -0,26784
Domains
Domains [InterPro]
IPR058003
TTP
2–270
TTP
2–270
1
283
Architecture
TTP 2-270 |
Legend:
ATT
STR
RBD
CBM
LEC
ENZ
CHP
LNK
TAS
TTP
UNK
Unmapped
Tail Spike Domain Segmentation
Tail Spike Domain Segmentation
This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.
Domain Layout
1
283
| Domain | Start | End | Length (AA) | Confidence |
|---|---|---|---|---|
| N-terminal | 1 | 264 | 264 | 0,6381 |
| Central domain | 265 | 272 | 9 | 0,0009 |
| C-terminal | 273 | 283 | 10 | 0,9534 |
Note: Constraints were applied during segmentation.
C-terminal too short, adjusted boundary
C-terminal too short, adjusted boundary
Legend:
N-terminal
Central domain
C-terminal
3D Structure with Domain Coloring
The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).
Domain Coloring
N-terminal
1-264
1-264
Central
265-272
265-272
C-terminal
273-283
273-283
Taxonomy
| Name | Taxonomy ID | Lineage | |
|---|---|---|---|
| Phage |
Enterobacter phage vB_Ecl_MII_002 [NCBI] |
3344473 | Viruses > |
| Host |
Enterobacter cloacae [NCBI] |
550 | cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales |
Coding sequence (CDS)
Coding sequence (CDS)
Genbank protein accession
XGU09887.1
[NCBI]
Genbank nucleotide accession
PQ039553
[NCBI]
CDS location
range 63560 -> 64411
strand +
strand +
CDS
ATGGAGAACTTCATCGTCGTTAACTCAGCAGGCGCTTACAACCGTATGTACATCTACAAGTTCCTGTTCCGTGACGGTGTGCAGCTTCAGGCATCTTGGTCCCACTGGGAGTTCGAACCGGGAGAGAAGGTCCTCGCGTCTGCGGCTATCGGCTCTACCATCTTCATCGTTAAGCAGAGTCCTCAGGGAGTTGACATTGAGCACCTCAGGTTCATTAAAGAGGCTACCGATATGGACAACGAGCCGTATCGTCTGCATCTGGACTCCAAGGCCACAATGTACATCCAGCCGAATACCTACAACCCGGACACCTTCGTTACACTGGTGGACATCGGGGCGGCTTATGGTGGTTCAGCTCCTCCTAAGGGCAACTACTTCATGGTGGATGACCAAGGGGCCTACGTGTCTCTGGGGCTGCTGGACGGTCAAAGTCTGGTGAACATCCGGGGTGACTGGTCGAACAAAACTGTGTTCATCGGCAGGTCTTACAACATGCGCTACAAGTTCTCTCGGTTCCTTATCAAGTCTGAGAATGACACTGGGGTGCAGACTGAGGACACCGGACGTCTACAGCTCCGTCGAGCTTGGGTGAACTATCAGGACACTGGCGCTCTTAGACTGACGGTCTCTAACGGTCAGCGTGAGTTCGTCAACATCCTGAACGGGTACACCTTGGGCCAACAGGCCTTAGGAACCAGCAATATCGGTGACGGACAGTTCCGCTTTGCGATGAACGGTAACGCGATGACCACAAGCCTTGTCCTTGAGTCCGACTATCCAACCCCAGTTTCCATCGTTGGGTGTGGATGGGGCATCATACGCCAAGAAAGCGCAACGAGTCTAACTTATTGA
Genome Context
Genome Context
Tertiary structure
PDB ID
9df9180c5d1985020625642e2ec4fcbde9b3de9d7c993d28d5e3f41dbef459bd
Model Confidence
Very high
pLDDT > 90
pLDDT > 90
High
90 > pLDDT > 70
90 > pLDDT > 70
Low
70 > pLDDT > 50
70 > pLDDT > 50
Very low
pLDDT < 50
pLDDT < 50