Protein

View in Explore
Genbank accession
QXO06429.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MRDLALGAYTQKDLTKKVNTIGDVTTLKTEAKTTAVGAINELKDNYEKIKNSIDTNTANFLIDQKLDPVKEDVKALHTQVDNYSINYKQSNDPTASINPTIDSATFLNTATGVIWTCIDKTKNKNRWINGNGEVAGALPSNPNLGDIGFGVGIAPKEITNKYNMYPMLGTFTPGHMNYGNYTDIRGNVMVWIPKLYIKTSNVDAAPYYGLKVEVSATQEEGFWCHRAFINNGKEIPGFFIDKYLASNQGGILGSRRNTVPLTCDSKFNSVALISGVSAKVALGNKITEDSDLDSDDLKSIKNRNSSFLEAVKNRGPEFQVLTVFAYNYLILLSKCIYQNAYNSNNFNNIEFAKSRTDRFAFIQGMNTMQSTQRDIQAIHNLDYKTAGYTDGTNALYRTGSVSDSKMGKISHNGHACGVVDLVGGLFNLAIGAMYGYILDRSYFGVIKESTNITDLDLESLVDTNNYDETTLPAEIITYINSDSDSPLGYFKDVGAKYNNANVRTTSEYKIDSCGIPKWSVLQDATVDTTRQTFQWRGNPTYKDTLTFPIVGSSFKDSFYSSVQFQKDTQGVEFGTRCILLPEI
Physico‐chemical
properties
protein length:583 AA
molecular weight: 64584,70430 Da
isoelectric point:5,82591
aromaticity:0,10292
hydropathy:-0,37719

Domains

Domains [InterPro]
DC_0946
STR
1–583
DC_0946
Coil
Unmapped
39–59
Coil
QXO06429.1
1 583
Architecture
STR
STR 1-583
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QXO06429.1
1 583
Domain Start End Length (AA) Confidence
N-terminal 1 419 419 0,2438
Central domain 420 572 154 0,1260
C-terminal 573 583 10 0,9946
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-419
Central
420-572
C-terminal
573-583

Taxonomy

  Name Taxonomy ID Lineage
Phage Campylobacter phage CJLB-14
[NCBI] 		2780166 No lineage information
Host Campylobacter jejuni
[NCBI] 		197 cellular organisms > Bacteria > Pseudomonadati > Campylobacterota > Epsilonproteobacteria > Campylobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QXO06429.1 [NCBI]
Genbank nucleotide accession
MW074126 [NCBI]
CDS location
range 77437 -> 79188
strand -
CDS
ATGAGAGATTTAGCTCTTGGTGCTTACACGCAAAAAGATTTAACCAAAAAAGTCAATACTATTGGTGATGTAACAACATTAAAAACCGAAGCAAAAACTACAGCAGTAGGAGCCATAAATGAACTTAAAGATAATTATGAAAAAATTAAAAATTCTATAGATACCAATACCGCTAATTTCTTAATAGATCAAAAATTAGATCCGGTTAAAGAAGATGTTAAAGCTTTGCATACACAAGTTGATAATTATTCTATAAACTATAAGCAATCAAATGATCCCACAGCTTCTATAAATCCTACAATCGATAGTGCAACTTTTTTAAATACAGCTACTGGAGTTATTTGGACTTGTATAGATAAAACAAAAAATAAAAATCGCTGGATAAACGGAAACGGAGAAGTTGCTGGTGCACTTCCAAGTAATCCAAATCTTGGTGATATTGGTTTTGGCGTGGGTATTGCACCTAAAGAAATTACTAACAAATATAATATGTATCCTATGCTAGGAACTTTTACTCCTGGTCATATGAATTATGGAAATTATACTGATATCCGCGGTAATGTTATGGTTTGGATACCTAAACTTTATATTAAGACTTCAAATGTAGACGCTGCACCATATTACGGATTAAAAGTTGAAGTTTCCGCTACTCAAGAAGAAGGTTTTTGGTGCCATAGAGCATTTATTAATAATGGTAAAGAAATTCCAGGTTTTTTTATAGACAAATATCTAGCATCTAACCAAGGGGGTATTTTAGGTTCTAGGCGTAATACAGTGCCTTTAACCTGTGATTCTAAATTTAACTCTGTAGCTTTAATCTCAGGAGTTTCTGCAAAGGTTGCTTTGGGTAATAAAATTACAGAAGATTCTGATTTAGATTCTGATGATTTAAAATCTATTAAGAATAGAAATTCAAGCTTCTTAGAAGCTGTTAAAAATAGAGGCCCTGAATTTCAAGTATTAACTGTATTTGCTTATAATTATTTGATTTTGTTGTCTAAATGTATATATCAAAATGCTTATAATTCAAATAATTTCAATAATATTGAGTTTGCTAAATCAAGAACAGATAGATTTGCATTTATTCAAGGTATGAATACTATGCAAAGTACTCAAAGAGATATTCAAGCTATTCATAATTTAGATTATAAAACTGCTGGGTATACAGATGGTACTAACGCGTTGTACAGAACAGGTAGTGTTTCAGATTCTAAAATGGGTAAAATTAGTCATAATGGTCACGCGTGTGGGGTTGTTGATTTAGTAGGCGGGTTATTTAATCTGGCTATAGGCGCTATGTATGGTTATATATTAGATAGAAGTTATTTTGGTGTTATCAAAGAAAGCACTAATATAACAGATTTAGATTTAGAATCTTTAGTAGATACTAATAATTATGATGAAACTACATTACCAGCAGAGATTATAACTTATATAAACAGTGACTCTGATAGCCCATTAGGTTATTTTAAGGATGTTGGTGCCAAGTACAATAACGCAAATGTAAGAACAACTTCTGAGTATAAAATAGATTCTTGCGGTATTCCAAAATGGAGTGTTTTACAAGATGCTACCGTAGACACCACAAGACAAACTTTCCAATGGAGAGGAAATCCAACGTATAAAGATACTTTAACATTTCCTATAGTAGGTTCAAGTTTTAAAGATAGTTTTTATTCAAGTGTTCAATTCCAAAAAGATACACAAGGTGTTGAATTTGGAACTCGCTGCATATTATTACCCGAAATTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
ea226612103bf90cfd768ec9a9911f8d89dba42516c3ff59c37d6ce4462a22d8
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5424
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Bacteriophages are an effective tool to reduce Campylobacter contamination in foods Vikram,A., Woolston,J. and Sulakvelidze,A. 2017-11-23 — GenBank