Protein

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Genbank accession
BAM34766.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MYLVLLERKHDLRSLERKCKKESGMLGSFRVFESTHEEGISDKAIIKHYEEEKALFSCFSLENSGEPTDTPNLDRPIIARDYELEWSDTSCTVPKEYQNKKCNNLRHEVLQLVDPNNKDFKNRKILIHVGNSAHDTLGCVLLGMQHDEEMIYKSNEAVKKFFDLVKDKGVNNFLFKVIDKA
Physico‐chemical
properties
protein length:181 AA
molecular weight: 21010,72620 Da
isoelectric point:6,17848
aromaticity:0,08287
hydropathy:-0,63425

Domains

Domains [InterPro]
IPR043732
STR
15–166
IPR043732
BAM34766.1
1 181
Architecture
STR
STR 15-166 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Helicobacter phage KHP30
[NCBI] 		1208236 No lineage information
Host Helicobacter pylori
[NCBI] 		210 cellular organisms > Bacteria > Pseudomonadati > Campylobacterota > Epsilonproteobacteria > Campylobacterales
Host Helicobacter pylori F32
[NCBI] 		102608 Bacteria > Proteobacteria > delta/epsilon subdivisions > Epsilonproteobacteria > Campylobacterales > Helicobacteraceae
Host Helicobacter pylori 35A
[NCBI] 		585535 Bacteria > Proteobacteria > delta/epsilon subdivisions > Epsilonproteobacteria > Campylobacterales > Helicobacteraceae
Host Helicobacter pylori F16
[NCBI] 		866344 Bacteria > Proteobacteria > delta/epsilon subdivisions > Epsilonproteobacteria > Campylobacterales > Helicobacteraceae
Host Helicobacter pylori F30
[NCBI] 		866345 Bacteria > Proteobacteria > delta/epsilon subdivisions > Epsilonproteobacteria > Campylobacterales > Helicobacteraceae
Host Helicobacter pylori F57
[NCBI] 		866346 Bacteria > Proteobacteria > delta/epsilon subdivisions > Epsilonproteobacteria > Campylobacterales > Helicobacteraceae

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
BAM34766.1 [NCBI]
Genbank nucleotide accession
AB647160.1 [NCBI]
CDS location
range 21378 -> 21923
strand +
CDS
ATGTATTTAGTATTACTGGAGAGGAAACACGATTTAAGATCGCTAGAAAGGAAATGCAAGAAAGAAAGCGGCATGTTAGGAAGCTTTAGAGTGTTTGAAAGCACGCACGAGGAAGGAATAAGCGATAAAGCGATAATTAAACACTATGAAGAAGAAAAAGCCTTATTCAGTTGCTTTTCATTAGAAAACAGCGGGGAGCCAACGGATACGCCGAATTTAGATAGGCCGATAATAGCGAGAGATTACGAGTTAGAGTGGAGCGACACAAGTTGCACGGTGCCTAAAGAATACCAAAATAAAAAATGCAATAACTTACGCCATGAAGTGTTACAGCTAGTAGATCCAAATAACAAGGATTTCAAAAACCGAAAAATTTTAATCCATGTAGGAAACAGCGCGCATGATACTTTAGGGTGTGTTTTGTTAGGGATGCAACACGATGAAGAGATGATTTATAAAAGCAACGAAGCGGTAAAAAAGTTTTTTGATTTAGTCAAAGACAAAGGCGTTAATAACTTTTTGTTTAAGGTGATTGATAAGGCGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
fcf83c63b91efd5100a1eb6e30f34b95e9a7a66188cc97225319bcfa901ff8c1
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7654
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequences of two Helicobacter pylori bacteriophages isolated from Japanese patients Uchiyama,J., Takeuchi,H., Kato,S., Takemura-Uchiyama,I., Ujihara,T., Daibata,M. and Matsuzaki,S. 2012 22997420 GenBank