Protein

View in Explore
Genbank accession
XUE03846.1 [GenBank]
Protein name
tail fiber domain-containing protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,89
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MANVIKTVLTYQLDGSNRDFNIPFEYLARKFVVVTLIGVDRKVLTINTDYRFATRTTISLTKAWGPSDGYTTIELRRVTSTTDRLVDFTDGSILRAYDLNVAQIQTMHVAEEARDLTADTIGVNNDGHLDARGRRIVNLANAVDDRDAVPFGQLKTMNQNSWQARNEAQGFRNEAETFRNQAEGFKNESGTNATNTNQWRNEAEGFRDEAEQFKNTATQQATAAATSAAAAHQSEVNAANSAIASANSATLAEQQADRAEREADKLGNWNALAGAIESVEDNNVTFKGDIRTPNNVVGGGLISNGAGHFEKGVHVGGLLDVGDDIAAHKDVWVDGVVVANGGIQQQSGSGSFNSMWRMYIKGGPGHVNNNQGLHLCWNESGGTGASSFITNKGAGSGGFVFRTVNFENSAETGRVTFTGDGAVMARHLQAANGARIEANNNIVGDSIFAGMGNCALDTVGNLVKGIWNNVGGDLYNYLQNKYHFAKPPGGVALFTSRGGDYLEGLVDNTAVGFRWFLSDRRLKENIKVLRSADDMLNIIRSYIPVSYKYKDSKYTDNRGRTVAVTGKKSRAGFITQDLIRIWPEAVDVLSDGMQSPDPNQIIGGLMLLVKNLDERVQELEKKNNV
Physico‐chemical
properties
protein length:625 AA
molecular weight: 67909,54910 Da
isoelectric point:5,79811
aromaticity:0,07840
hydropathy:-0,41600

Domains

Domains [InterPro]
IPR005604
ATT
1–131
IPR005604 Coil Coil IPR030392
DC_0264
STR
1–618
DC_0264
IPR030392
CHP
518–586
IPR030392 Coil
XUE03846.1
1 625
Architecture
ATT
STR
ATT 1-131 | STR 132-623 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XUE03846.1
1 625
Domain Start End Length (AA) Confidence
N-terminal 1 281 281 0,9566
Central domain 282 480 200 0,5453
C-terminal 481 625 144 0,9838
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-281
Central
282-480
C-terminal
481-625

Taxonomy

  Name Taxonomy ID Lineage
Phage Yersinia phage vB_Yep_9
[NCBI] 		3421738 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Yersinia enterocolitica
[NCBI] 		630 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XUE03846.1 [NCBI]
Genbank nucleotide accession
PV596790.1 [NCBI]
CDS location
range 32963 -> 34840
strand +
CDS
ATGGCTAACGTAATTAAAACCGTTTTGACTTACCAGTTAGATGGCTCCAATCGTGATTTTAATATCCCGTTTGAATATCTAGCCCGTAAGTTCGTAGTGGTAACTCTTATCGGCGTAGACCGTAAGGTCCTTACGATTAATACAGACTATCGCTTTGCTACACGTACTACCATCTCTCTGACCAAGGCTTGGGGTCCATCTGATGGATACACGACCATCGAGTTGCGTCGAGTAACCTCCACTACAGACCGCTTGGTTGACTTTACGGATGGTTCAATCCTCCGTGCGTATGACCTTAACGTCGCTCAGATTCAGACGATGCACGTAGCGGAAGAGGCCCGTGACCTAACTGCTGATACCATCGGTGTCAATAATGATGGTCACTTGGATGCCCGTGGTCGTCGAATTGTGAACCTAGCGAACGCTGTGGATGACCGTGACGCTGTTCCTTTTGGTCAACTTAAGACCATGAACCAGAACTCGTGGCAAGCACGTAATGAGGCTCAAGGTTTCCGCAATGAGGCTGAGACTTTCCGTAACCAAGCGGAGGGCTTTAAGAACGAGTCAGGCACTAACGCTACGAATACTAATCAGTGGCGTAATGAGGCTGAGGGGTTCCGTGATGAGGCCGAACAATTTAAGAACACTGCGACACAACAGGCCACCGCTGCTGCGACCTCCGCTGCTGCTGCCCACCAATCTGAGGTGAACGCTGCGAACTCCGCTATTGCTTCCGCTAACTCTGCTACTTTGGCAGAACAGCAGGCAGACCGTGCGGAACGTGAAGCGGACAAGTTGGGTAACTGGAATGCGCTTGCAGGGGCCATTGAGAGCGTTGAGGATAACAATGTCACGTTTAAAGGAGACATCCGAACACCTAATAACGTTGTGGGTGGTGGTCTAATCTCAAACGGTGCTGGTCATTTTGAGAAAGGAGTACATGTTGGAGGTTTATTAGATGTCGGTGATGACATAGCGGCACATAAGGATGTGTGGGTAGATGGTGTGGTTGTCGCTAATGGTGGTATACAGCAACAATCGGGGTCTGGTTCTTTTAATTCGATGTGGAGAATGTACATTAAAGGAGGGCCGGGACATGTGAATAACAACCAAGGTCTTCACCTTTGTTGGAACGAGTCTGGTGGTACTGGAGCGTCCAGCTTTATAACCAACAAGGGTGCAGGCAGTGGTGGCTTCGTATTCCGAACGGTAAACTTTGAAAACTCTGCTGAGACCGGTCGCGTTACATTCACTGGCGACGGTGCGGTAATGGCCAGACACTTACAGGCGGCTAACGGTGCGCGCATCGAGGCCAACAACAATATAGTGGGTGATAGTATCTTCGCAGGAATGGGCAACTGTGCGTTAGATACTGTAGGTAACTTAGTAAAAGGTATATGGAACAACGTTGGTGGCGATTTGTATAACTACTTGCAGAACAAGTACCACTTCGCTAAGCCGCCTGGAGGTGTTGCATTATTTACCTCACGCGGTGGTGACTACCTTGAGGGCCTTGTGGATAACACAGCCGTTGGGTTCCGGTGGTTCTTGTCCGACAGAAGGCTTAAAGAGAACATAAAGGTTCTACGCTCCGCTGATGACATGCTCAATATTATCCGCTCGTACATCCCAGTTTCCTATAAGTATAAGGACTCTAAGTACACCGATAACCGTGGAAGAACAGTTGCTGTTACTGGTAAGAAGTCTCGTGCAGGCTTCATTACTCAGGACCTGATAAGAATCTGGCCCGAAGCGGTAGATGTATTATCTGATGGAATGCAATCCCCAGACCCTAACCAAATCATCGGTGGGCTAATGCTGCTTGTTAAGAACCTAGATGAGCGGGTTCAGGAGCTAGAGAAGAAGAATAACGTTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
ce0ef8918ba86324b692af0ac0669bbab7d146be7ba15c9d45c343c902a52108
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6632
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50