Protein

View in Explore

Genbank accession

QHR65688.1 [GenBank]

Protein name

putative tail fiber protein

RBP type

Evidence RBPdetect

Probability 0,91

Evidence RBPdetect2

Probability 0,94

Protein sequence

MNLTRPNSAIADLVEATYRKRRSFEAGFTLRNSREVLLLAAEGNYYQWKGTFPKVVPANSTPATTGGISSLAWQSVGTADDIAIINAKFTAVQQQIDDLSEAIPEAGKSAYQIALDNGFVGTEAQWLASLKGDTGAQLNIKGSLASTSELPSTGNVAGDGYIVGDVIYAWDGSVWKLISSLGPEGKSAYEVWLADGNTGSVYDFLASIKGDKGDVGPTGPQGAPGVNANGFDYRGDLPSTSNLPQPNSENVSQAYSINGNLYVSNGTAWVNMGNIVGPQGPQGEAGKDGLDGTDGDEGKSAYQSWLDAGNEGTEVDFVAALKGEKGDKGEKGDPGPQGEQGVQGIQGPVGAGLSVNGELADVSELPSVAEVGDAYIIKNELYVWIDDNQTWLNVGSLGGRSITAKGHVANGEALPVYNNYGDAYLTEDTSNLYIYTYDQDTNSASFVDMGSIKGDKGEKGDKGDKGDPGTNGTNGTDGANGKDGAQWFVATTNPVAGDGVINDYAFNTTTGAVFKKTDSSTWTLIGTLPSIPEAPQDGLTYGRSDGNWIEISGSDPTEAITPTRVTAGFMELETTTANSGASWTPSGTSNMYVVTVTDALTVGAWPGVTGSTKPKAFSAMIYLIQDTTGHTVTLDASYGALNDTEIATTANAVTILQLTYPGVGNIVDMVVVTR

Physico‐chemical properties

protein length:	674 AA
molecular weight:	70197,03270 Da
isoelectric point:	4,23834
aromaticity:	0,08160
hydropathy:	-0,31869

Domains

Domains [InterPro]

IPR040775
RBD
12–77

IPR040775 IPR050149 SSF58046 IPR058970

G3DSA:2.10.10.80
ATT
18–83

G3DSA:2.10.10.80 G3DSA:1.20.5.320 G3DSA:1.20.5.320

DC_1593
STR
20–674

DC_1593

QHR65688.1

1 674

Architecture

ATT

STR

ATT

STR

ATT 12-83 | STR 84-497 | ATT 498-552 | STR 553-674

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Domains [InterPro]

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR040775	RBD	DC_0821	12	77	InterPro cluster	Tail spike TSP1/Gp66, N-terminal domain	Central	High	Text match	1281 proteins / 1285 hits
G3DSA:2.10.10.80	ATT	G3DSA:2.10.10.80	18	83	Merged direct domain	G3DSA:2.10.10.80	N-terminal	Low	Positional only	383 proteins / 383 hits
DC_1593	STR	DC_1593	20	674	Novel HMM	DC_1593	Central	Low	Positional only	123 proteins / 123 hits
IPR050149	Unmapped	-	182	485	InterPro	Collagen superfamily	-	-	-	-
G3DSA:1.20.5.320	STR	G3DSA:1.20.5.320	323	380	Merged direct domain	G3DSA:1.20.5.320	Central	Low	Positional only	67 proteins / 67 hits
SSF58046	ATT	SSF58046	498	552	Merged direct domain	SSF58046	N-terminal	Low	Positional only	12 proteins / 12 hits
G3DSA:1.20.5.320	STR	G3DSA:1.20.5.320	523	555	Merged direct domain	G3DSA:1.20.5.320	Central	Low	Positional only	67 proteins / 67 hits
IPR058970	RBD	DC_0552	583	665	InterPro cluster	Putative phage tail fibre, C-terminal domain	C-terminal	Low	Positional only	292 proteins / 292 hits

Taxonomy

	Name	Taxonomy ID	Lineage
Phage	Escherichia phage nepoznato [NCBI]	2696431	Uroviricota > Caudoviricetes > Stephanstirmvirinae > Phapecoctavirus nepoznato >
Host	Escherichia coli K-12 [NCBI]	83333	Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Escherichia

Coding sequence (CDS)

Genbank protein accession

QHR65688.1 [NCBI]

Genbank nucleotide accession

MN850571 [NCBI]

CDS location

range 119890 -> 121914
strand -

CDS

ATGAATTTAACAAGACCTAATAGTGCGATAGCCGATCTGGTAGAAGCTACTTATCGAAAACGTCGCAGTTTTGAGGCAGGTTTTACATTACGTAATTCCCGTGAAGTTTTGCTGTTAGCGGCAGAAGGGAATTATTACCAATGGAAAGGAACTTTTCCTAAAGTAGTTCCAGCAAACTCTACGCCAGCCACCACAGGTGGTATTTCTTCCCTTGCATGGCAAAGTGTTGGGACTGCTGATGATATAGCAATTATCAATGCCAAGTTTACGGCAGTGCAACAACAGATCGATGATTTGTCAGAAGCAATACCTGAAGCTGGTAAATCGGCTTATCAGATCGCACTTGATAATGGTTTTGTTGGAACAGAAGCACAATGGCTTGCTTCTTTGAAAGGGGATACTGGTGCTCAACTTAATATTAAAGGATCATTAGCAAGCACTAGTGAACTACCATCTACAGGTAACGTTGCAGGGGATGGTTATATCGTAGGTGATGTGATTTACGCTTGGGACGGTTCTGTTTGGAAACTTATTTCTTCTCTTGGACCAGAAGGGAAATCAGCTTACGAGGTATGGTTGGCAGATGGTAATACAGGATCTGTTTATGACTTTCTTGCCTCTATAAAAGGTGATAAAGGAGACGTTGGTCCTACAGGTCCACAGGGTGCACCTGGTGTCAACGCTAATGGTTTTGATTACCGTGGAGATTTGCCTTCTACAAGTAACTTACCACAACCTAACTCTGAAAACGTAAGCCAAGCTTATTCTATTAATGGTAATCTTTATGTCTCTAATGGGACAGCTTGGGTCAACATGGGTAATATTGTTGGTCCTCAAGGTCCACAAGGTGAGGCAGGTAAAGACGGTCTAGATGGAACAGATGGAGACGAAGGGAAATCTGCATATCAAAGTTGGCTGGACGCTGGTAATGAAGGGACAGAAGTAGATTTTGTTGCTGCTTTAAAAGGTGAAAAGGGAGACAAGGGCGAGAAGGGAGATCCTGGTCCACAAGGTGAACAGGGTGTTCAAGGTATCCAAGGTCCAGTTGGTGCAGGTCTTTCTGTAAACGGAGAATTGGCAGATGTTTCAGAGTTACCCTCTGTAGCGGAGGTCGGTGATGCCTACATCATAAAAAATGAACTTTATGTGTGGATTGATGACAACCAAACTTGGCTCAATGTAGGCAGTTTGGGAGGCAGATCTATTACAGCTAAAGGTCATGTTGCAAACGGAGAAGCTCTCCCTGTTTATAATAACTATGGTGATGCCTACTTAACTGAGGATACCAGTAATCTTTACATCTATACCTACGATCAAGACACCAATTCCGCATCTTTTGTTGACATGGGAAGTATTAAGGGCGACAAAGGTGAAAAAGGGGATAAAGGAGATAAGGGTGATCCTGGAACAAACGGAACCAACGGTACTGATGGGGCCAACGGTAAGGACGGCGCACAGTGGTTTGTAGCAACAACTAATCCAGTCGCAGGAGACGGTGTTATCAATGATTACGCCTTCAATACTACCACTGGAGCAGTATTTAAGAAAACAGATTCTTCTACGTGGACACTTATAGGAACTCTTCCTAGTATACCAGAAGCCCCTCAAGACGGCTTGACTTATGGTCGTTCTGATGGAAACTGGATTGAAATATCAGGATCAGATCCTACGGAAGCTATAACACCAACTAGAGTTACAGCAGGTTTCATGGAACTTGAAACAACTACTGCCAACTCTGGAGCATCTTGGACTCCTTCTGGAACTTCCAATATGTATGTTGTTACAGTAACCGATGCTTTAACAGTTGGAGCATGGCCTGGTGTCACTGGCTCTACAAAGCCTAAAGCGTTTTCAGCAATGATTTATTTGATTCAAGATACAACGGGACACACGGTTACACTAGATGCGTCTTATGGAGCACTGAATGATACAGAAATAGCAACTACTGCCAACGCAGTAACAATTTTGCAATTAACGTATCCTGGTGTGGGTAATATCGTGGACATGGTTGTTGTAACACGATAA

Genome Context

Tertiary structure

PDB ID

6468f3f1e2ef7e503adf5e54b1274563f35d52bf55bf50403d922d83e944aeae

ESMFold

Source ESMFold

Method ESMFold

Resolution 0,7633

Oligomeric State monomer

Download PDB

Model Confidence

Very high
pLDDT > 90

High
90 > pLDDT > 70

Low
70 > pLDDT > 50

Very low
pLDDT < 50

Literature

Title	Authors	Date	PMID	Source
Exploring the Remarkable Diversity of Culturable Escherichia coli Phages in the Danish Wastewater Environment	Olsen,N.S., Forero-Junco,L., Kot,W. and Hansen,L.H.	2020	—	GenBank

Protein

Domains

Domains [InterPro]

Domains [InterPro]

Taxonomy

Coding sequence (CDS)

Coding sequence (CDS)

Genome Context

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)

Model Confidence

Literature