Protein

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Genbank accession
XYY30673.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,75
Protein sequence
MRSTSASLNWIKKAVGRFWQCGQKKRELMVSLRGSGLSPEKTVKAGAVSHVAISASQLFVFDPNNPDNTAYPFAVSGGKVVIPKAMIYDAVIETLVSRKVVADEVKAGVSITSPVIRSAVIQNGNFQVDSQGNLNIGGLFSVTSQGQLTIRYSNQNVGLVIRNDKIEVYDQNGRLAVRIGRLR
Physico‐chemical
properties
protein length:183 AA
molecular weight: 19820,54390 Da
isoelectric point:10,16320
aromaticity:0,06557
hydropathy:-0,05738

Domains

Domains [InterPro]
DC_0515
RBD
40–183
DC_0515
IPR015406
RBD
43–121
IPR015406
XYY30673.1
1 183
Architecture
RBD
RBD 40-183
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XYY30673.1
1 183
Domain Start End Length (AA) Confidence
N-terminal 1 130 130 0,9745
Central domain 131 172 43 0,2109
C-terminal 173 183 10 0,9040
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-130
Central
131-172
C-terminal
173-183

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage vB_EcoP_phi367
[NCBI] 		3411876 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XYY30673.1 [NCBI]
Genbank nucleotide accession
PV189406.1 [NCBI]
CDS location
range 14203 -> 14754
strand +
CDS
ATGAGGTCGACAAGCGCATCACTAAACTGGATAAAGAAGGCGGTGGGGCGTTTCTGGCAATGTGGTCAAAAAAAGCGGGAGTTGATGGTATCACTGCGGGGATCGGGATTGTCGCCGGAAAAGACAGTGAAGGCAGGCGCTGTAAGTCATGTTGCAATTTCTGCGTCGCAGTTGTTTGTCTTTGACCCGAACAACCCGGATAACACCGCCTATCCGTTTGCGGTATCAGGTGGCAAGGTTGTGATCCCGAAAGCGATGATTTATGACGCGGTGATTGAAACACTGGTGTCGCGGAAGGTTGTGGCGGATGAGGTAAAAGCCGGGGTAAGTATCACTTCGCCAGTTATCCGGAGTGCCGTTATTCAGAACGGAAACTTTCAGGTTGATTCTCAGGGTAACCTGAATATTGGAGGCCTTTTCAGTGTTACGTCACAAGGGCAACTGACAATTCGTTACTCTAATCAGAATGTAGGACTGGTGATCCGCAATGATAAAATTGAGGTTTATGATCAGAATGGACGACTGGCTGTTCGCATAGGCAGATTACGCTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
0bed2524f2b30db3492df47a6ff9069506e7399c5114bf4cc1c323ca0e4d6efb
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,7214
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50