Protein

View in Explore
Genbank accession
QGT52266.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,88
Protein sequence
MSTSIALLDTTQYVKVNSERHYVMLQSLRDTVRIAFSDTQPVVSNIAFHTLDGSDEPLRLHDIDTDVWVLAMTDRSSLVITEFDTQTVHVYPPEVDLENGYFEELEPDYAYGWIDHMDKTDNPRTIWSFATNDALPRLDKKVFPTTSGDFFIASDNAADTGIEFTCSCIAANGDALTLIATTDATDGTTPVQFGSGLDINLVFISGQDQTPLGDIYFTNLNDFTGGQPNTVTSVLAHVPVDYGCSPQALVRVPNNRRLIIKKFYISHARTGGTIGSAVIQLRTKRANGSEVVSEEWKVQTGFNPTDGINLVYEAGSILEFVVKSVSDVDHDVSAKMLFIYEEV
Physico‐chemical
properties
protein length:343 AA
molecular weight: 37854,79950 Da
isoelectric point:4,44966
aromaticity:0,09329
hydropathy:-0,12624

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QGT52266.1
1 343
Domain Start End Length (AA) Confidence
N-terminal 1 145 145 0,2307
Central domain 146 332 188 0,0359
C-terminal 333 343 10 0,9986
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-145
Central
146-332
C-terminal
333-343

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage MZH0603
[NCBI] 		2664193 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio variabilis
[NCBI] 		990271 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QGT52266.1 [NCBI]
Genbank nucleotide accession
MN592897.1 [NCBI]
CDS location
range 35520 -> 36551
strand -
CDS
ATGAGTACATCCATTGCTTTGTTAGATACAACACAGTATGTGAAGGTTAACAGTGAGAGACATTATGTAATGTTACAGTCCCTCCGTGATACTGTACGCATAGCATTCTCAGATACGCAACCTGTTGTGTCTAACATCGCATTCCATACACTCGACGGTAGTGATGAACCCCTACGGTTACATGACATAGATACCGATGTATGGGTACTAGCGATGACTGATAGATCGAGTCTCGTCATTACTGAGTTCGATACCCAAACTGTTCATGTGTACCCGCCTGAAGTTGATTTAGAGAATGGTTACTTTGAAGAACTTGAACCTGACTACGCGTATGGTTGGATCGACCACATGGATAAAACAGATAATCCTAGGACTATCTGGTCTTTCGCTACAAACGACGCGTTACCTAGATTGGATAAAAAAGTGTTTCCTACAACGAGCGGTGATTTCTTCATTGCATCTGATAACGCAGCAGACACTGGTATCGAGTTCACATGTAGTTGCATAGCTGCGAACGGTGATGCATTAACCCTGATAGCCACAACTGACGCGACCGATGGTACCACACCTGTGCAGTTTGGTTCGGGGTTGGATATAAACTTAGTGTTCATATCTGGACAAGACCAAACACCCCTGGGTGATATCTATTTCACTAACTTGAATGACTTCACTGGAGGTCAGCCTAACACAGTTACTAGTGTGCTCGCACATGTACCAGTTGATTACGGTTGCTCCCCTCAAGCATTGGTGAGAGTACCGAATAACAGACGTTTGATAATAAAGAAATTCTACATAAGTCATGCCAGAACTGGAGGTACTATCGGTTCTGCCGTGATACAACTTAGGACGAAAAGAGCTAACGGATCAGAAGTTGTATCAGAAGAATGGAAGGTGCAGACAGGTTTCAACCCGACAGATGGTATTAACTTAGTTTATGAAGCTGGCTCCATATTAGAGTTCGTAGTGAAATCAGTGTCTGATGTCGACCATGACGTATCCGCTAAAATGTTATTTATATACGAAGAGGTTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
de024a7edc3c0c08f823eefce67d0ccd39c8a46703dc99e114ab62d029a1865c
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6419
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and Genetic Analysis of a Novel Vibrio Phage MZH0603 from the Yellow Sea Xue,C. 2016-02-08 — GenBank