Protein

View in Explore
Genbank accession
XOT37909.1 [GenBank]
Protein name
tail fiber
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,89
Protein sequence
MIVYNNQAPDAVNNVGQFGATEGSIGAYKQAAEYAADSKYWALLAESKFGTIDDLIAEVERLYQQGVLMKQDIEDLKQDFKDQDARLMSLIAQTNAAVSDANNAVALINQKLIEVQNQLDVLLGMSVDVTTLPPGTPATGSFNPNTGVISLGIPEGDPGKDGSVKDLDTAPTGVPELGDLGFYVDKDDNTVHKTTLDNIANLIPSVRSVSINGGPALDGEVALTLNKETVGLGNVLNVAQYSRQEINDKFDKTTKTYQSKAEADADAQYRQVGEKVLVWEATKYEFYTVASNKTLTPVKTEGRILTVNSRSPDSSGNIDITIPTGNPSLYLGEMVMFPYDPTKNISYPGVLPADGRLVSKESALDLGPSLISGQLPVVSETEWQGGARQYFSWGKLADGITDADSTNFISIRLPDWTGGEAIRSPDSDKDSNYKGRVQSQIPYIVTVNGKAPDDANGNVVLTAANVGAAASGANSDITSLNGLTTPLSVAQGGTGASDVGNARISLNLQTFHAINGEGDNLYSSMSTPDGSKQIRLANSGSFKLINQSDSNTIPFAIESGGTGATSASEARENLGVGAISTISGYTAIQSPNKNYRLMLGNEGTFVYQTTEGNTAPIPIGSGGTGAISEAAARVNLKVDKLIQSSTDTKLLDGSGEHTFFITDADWGYFNNSDSSRIALPVISGGTGGKTPAEGSEKLGAMHCQYGSSVYYGGDDLPTGIGFYSGDSSPFPGGNGAPFTYAEIMTIAEGGRGGNWSQIGFSTITYEAPRYRQRTSDPSLITNWRDFLVRDLNTTVDVNGFVKIASPIVKLKSDGSSEVNDQAQGATTERLDVGVYKISGVLGFNSDASWGGNDGGFSIPQNSNGLPLLWVDYEVDEEGDITLKTYHRTHEGVPSFASNVIDGVVDGEPIDIPSGRWIDLRVEMPSK
Physico‐chemical
properties
protein length:926 AA
molecular weight: 98107,22450 Da
isoelectric point:4,49121
aromaticity:0,07451
hydropathy:-0,31663

Domains

Domains [InterPro]
Coil
Unmapped
73–93
Coil DC_0709
IPR058008
RBD
792–925
IPR058008
XOT37909.1
1 926
Architecture
STR
STR 183-926
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage EK5
[NCBI] 		3389963 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XOT37909.1 [NCBI]
Genbank nucleotide accession
PQ805429.1 [NCBI]
CDS location
range 36713 -> 39493
strand -
CDS
ATGATCGTTTATAATAACCAAGCACCTGATGCAGTGAATAACGTTGGGCAGTTTGGTGCTACTGAAGGCTCTATCGGAGCTTACAAGCAAGCAGCAGAATATGCAGCTGACTCCAAATATTGGGCACTGTTAGCAGAATCTAAGTTTGGTACAATTGATGACTTGATCGCTGAAGTAGAACGTCTGTATCAACAGGGTGTTCTGATGAAGCAAGATATTGAAGATCTTAAGCAGGACTTTAAAGATCAAGATGCTCGTCTGATGAGCTTGATTGCTCAGACTAATGCAGCAGTATCTGATGCAAATAACGCAGTCGCCCTGATTAACCAGAAACTCATTGAAGTCCAGAATCAGCTTGATGTTCTGTTAGGAATGTCTGTTGATGTAACAACTCTCCCTCCGGGAACTCCGGCTACTGGCTCTTTTAATCCTAACACTGGTGTAATCTCTTTAGGTATTCCAGAAGGTGATCCCGGAAAAGATGGTTCTGTTAAGGATTTGGATACAGCACCTACAGGTGTTCCAGAGCTAGGTGATTTAGGTTTCTATGTTGACAAAGATGACAATACCGTCCACAAAACTACTCTAGATAACATTGCTAACTTAATCCCATCTGTTCGTTCTGTCTCTATTAACGGCGGTCCAGCTCTTGATGGAGAGGTTGCTCTAACACTTAACAAAGAGACGGTAGGTTTAGGAAATGTTCTGAACGTTGCTCAGTACAGTCGTCAAGAGATTAATGACAAGTTTGATAAAACCACCAAGACATATCAATCTAAAGCAGAAGCTGATGCTGACGCTCAATATCGCCAAGTTGGTGAGAAGGTCTTAGTTTGGGAAGCTACTAAGTATGAATTTTATACTGTTGCTTCTAACAAAACATTAACTCCTGTTAAGACTGAAGGTAGAATCCTTACTGTTAACTCTCGCTCTCCAGACTCAAGTGGTAACATTGATATTACCATTCCAACAGGAAACCCATCTCTGTATCTTGGTGAGATGGTGATGTTCCCTTATGACCCAACTAAGAATATCTCCTACCCAGGAGTTCTTCCTGCCGATGGTCGTTTGGTATCAAAAGAGTCTGCTCTAGATTTAGGCCCATCTCTTATTAGTGGACAGCTTCCTGTTGTCTCAGAGACAGAGTGGCAGGGTGGTGCTAGACAATATTTCTCTTGGGGTAAGCTGGCTGATGGTATAACTGATGCAGATTCTACTAATTTTATTAGCATTCGACTTCCCGACTGGACTGGTGGTGAGGCTATCCGCTCTCCTGACTCAGATAAGGATTCCAATTACAAAGGGCGTGTTCAATCTCAGATTCCTTACATTGTAACAGTAAATGGAAAAGCTCCTGATGATGCTAATGGTAACGTAGTCCTCACAGCTGCTAATGTTGGTGCAGCGGCATCCGGGGCAAACTCAGATATCACCTCTCTTAACGGATTAACTACTCCTCTATCTGTTGCCCAAGGTGGTACAGGCGCCAGTGATGTAGGTAATGCTAGAATTTCTTTAAACTTACAAACATTTCATGCCATAAATGGGGAAGGTGATAATCTTTACAGCTCTATGAGTACTCCAGATGGGAGTAAACAAATACGGCTCGCAAACAGTGGTAGTTTTAAGTTGATAAACCAGTCAGATTCAAACACTATACCTTTTGCTATAGAATCGGGTGGTACAGGAGCTACTTCAGCTTCTGAAGCTAGGGAGAATCTTGGTGTTGGTGCTATTTCAACTATAAGCGGATATACTGCAATACAATCCCCCAATAAAAATTACCGGCTAATGCTTGGTAATGAGGGCACTTTTGTCTACCAAACAACAGAGGGTAATACAGCTCCAATCCCTATAGGGTCAGGTGGTACGGGAGCTATATCTGAAGCTGCTGCTCGTGTCAATCTGAAAGTTGATAAACTTATCCAGAGTTCAACTGACACTAAGCTCTTAGATGGTTCTGGAGAACATACCTTCTTTATTACAGATGCAGATTGGGGGTATTTCAATAACTCCGACTCTTCTCGAATAGCTTTGCCGGTAATAAGTGGTGGTACAGGAGGGAAGACTCCAGCCGAAGGTTCTGAAAAACTAGGGGCAATGCATTGTCAGTACGGTTCCTCAGTCTACTACGGTGGTGATGATTTACCAACTGGTATTGGATTCTACAGCGGGGACTCGTCACCTTTTCCGGGAGGTAATGGTGCACCCTTCACATATGCGGAGATAATGACTATTGCTGAAGGTGGTCGTGGAGGTAACTGGTCCCAAATAGGGTTCTCTACTATCACATATGAAGCCCCTCGCTATAGACAAAGGACTAGTGACCCCTCTTTAATCACAAACTGGCGTGACTTCTTAGTAAGGGATTTGAACACTACCGTAGATGTTAATGGTTTTGTTAAGATTGCATCGCCTATAGTCAAACTAAAATCTGACGGGTCTTCTGAAGTTAATGACCAAGCCCAAGGAGCAACAACCGAAAGATTAGATGTTGGTGTCTATAAAATCTCAGGAGTCTTAGGGTTTAACTCTGATGCCTCTTGGGGTGGTAATGACGGTGGTTTTTCTATTCCTCAGAACTCTAACGGATTACCTCTTCTTTGGGTTGATTATGAAGTTGATGAAGAAGGTGATATTACTCTGAAAACTTACCATCGAACCCATGAGGGAGTTCCTTCTTTTGCAAGTAATGTAATAGATGGTGTGGTGGATGGTGAACCAATTGATATCCCTTCTGGAAGATGGATTGACCTTCGTGTTGAGATGCCTTCTAAATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
ad1a7d10e17409554d48c3010c2b9f787e1e74c5f5ca8de38af4280d10c588cf
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6249
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Investigation of the effectiveness of bacteriophages isolated from environmental samples against clinical strains of Extraintestinal pathogenic Escherichia coli (ExPEC) producing extended-spectrum beta-lactamase (ESBL) Kulubecioglu,E., Karaynir,A., Bozok,T., Salih Dogan,H., Coral,G., Bozdogan,B. and Ocal,M.M. — — GenBank