Protein

View in Explore
Genbank accession
UPW37967.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,68
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MATLKAIQFKRSKTAGAKPTVDQLVEGELAINLRDRTIYTKTDQNQIIDLGFAKGGQVDGDILQNGTFNLNGNMFVYAGKYIEFLPKTAGNGAWANQHLTKAPIFADLSSTASVSEYHPLIKQRYKDGTFSAGTLVSEGSFRVHYIDSTAPDNSKHWVFNRNGNFIVDSGSIEVRTGNISASGNINSANGIITGPEIVTKNINFSTKPFIANANIGYDWVSLPTWVYNPPADGSDNTTNGLNYLRKLRASSASSIFHEIADCRKGKPQEISWWTGVGPASFQWAFDTSGRITAGKSISVGLPDNGANGRYPLDSAISIGIAIGDNDTGIKWVRDGVYDLMANGISSATILNNGINSTKKLMVGYSRDSGSTWDFPNNNQAMFTARTDVDGNNNGDGQTHIGYSSNAKMYHYFRGAGRMSVSMAEGLIVEPGILDIKTGSNSVAIRADGTINSTQRISMRTGLFLNGDDNTNALSFKAPSGVDGTKTINWDAGIRNGQNKNTVTLKAWGNSFNAGGGNRETVFEVSDSQGYYFYAQRTNPAVAGGIGPVNFKFNGTIETGHIIGLGDITASGTGSFGGNVTMTNGLFVQGGSSITGQVKIGGTADALRIWNAEYGAIFRRSEDKLYIIPTPQNAGESGGISNLRPFYITLSTGQVSMDHVVDIGGGRFKVDTTGTTAGQRITVNAASDAVVLNAPNQESSNFIQGRKANVTKWYLGIGDGGNVVRMHNYTYAHGIALNADTVDITKALKIGSDIRIGLDGNITGSTALENFKNLNTTLNRKVNVGTWSGGAAAGWYKFATVTMPQSVATAQFKITGGNGYNVNSSEQATITEIVLRTGNNNPKGINATLWARTGNGFTNIATINTSGDDYDVYLYVGTYADKLIVEYDYTANTRYISVVGLNDVNQTPVAELPTGHQRGQVYMMYSDAQIPYPVGAPIPWPSDSVPAGFALMEGQTFDTGAYPKLAAAYPSGTIPDMRGQTIKGKPSGRAVLSAEADGIKSHNHGGSVASTDLGTKNTSSFDYGTKNTSSFDYGTKTSNTTGNHNHSVSGNTGAAGNHQHSQTGPRGPNNQPTGIFPNGATQISGTQVVSFGISNGVVPGVNQYIAKSSTEGNHTHSWSGTTNTTGNHAHTVGIGAHSHSVGIGAHSHSVAIGSHGHGLTINSTGNTENTVKNIAFNYIVRLA
Physico‐chemical
properties
protein length:1182 AA
molecular weight: 125197,98110 Da
isoelectric point:8,50655
aromaticity:0,08629
hydropathy:-0,34518

Domains

Domains [InterPro]
DC_0468
STR
1–680
DC_0468 G3DSA:6.20.80.10 DC_2005 SSF88874
IPR048388
ATT
689–767
IPR048388 IPR051934
SSF88874
STR
926–1072
SSF88874 DC_0163
IPR037053
ATT
930–982
IPR037053
IPR011083
ATT
934–981
IPR011083
UPW37967.1
1 1182
Architecture
STR
ATT
STR
ATT
STR
STR
STR 1-680 | ATT 688-767 | STR 768-929 | ATT 930-982 | STR 983-1072 | STR 1087-1182
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
UPW37967.1
1 1182
Domain Start End Length (AA) Confidence
N-terminal 1 307 307 0,0840
Central domain 308 506 200 0,3279
C-terminal 507 1182 675 0,7496
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-307
Central
308-506
C-terminal
507-1182

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage vB_EcoM_ESCO10
[NCBI] 		2918865 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UPW37967.1 [NCBI]
Genbank nucleotide accession
OM386655 [NCBI]
CDS location
range 144273 -> 147821
strand +
CDS
ATGGCTACTTTAAAAGCGATACAATTTAAAAGAAGTAAGACAGCTGGTGCCAAGCCTACTGTAGACCAGTTGGTTGAAGGTGAACTGGCTATTAACTTACGCGACCGTACGATTTATACAAAAACCGACCAGAATCAGATTATTGACCTTGGCTTTGCTAAAGGTGGACAGGTTGATGGTGATATTCTCCAGAACGGCACATTTAACCTCAATGGTAATATGTTCGTTTACGCTGGTAAGTATATTGAATTCCTGCCTAAAACTGCGGGTAATGGCGCCTGGGCAAACCAACATTTAACTAAAGCTCCTATCTTTGCAGATTTAAGTTCAACTGCCTCAGTATCAGAATATCATCCTCTGATTAAGCAACGTTATAAAGACGGTACTTTTTCTGCTGGTACATTAGTAAGCGAAGGCTCATTTAGAGTTCATTATATTGATTCTACAGCTCCAGACAATTCTAAACACTGGGTCTTTAATCGAAATGGTAATTTCATCGTAGATTCTGGTAGTATTGAAGTTCGTACCGGTAATATTTCTGCTTCAGGCAATATTAACTCTGCTAATGGTATTATCACTGGTCCTGAAATTGTTACTAAAAATATTAATTTCAGTACAAAACCATTTATAGCTAATGCCAACATTGGATATGATTGGGTTTCTTTACCTACTTGGGTTTATAACCCACCGGCTGATGGTTCTGATAATACTACTAACGGTTTAAACTATTTGCGTAAATTGCGTGCATCAAGTGCATCAAGTATTTTCCATGAAATTGCTGATTGTCGAAAAGGCAAGCCACAAGAAATTTCCTGGTGGACCGGTGTAGGTCCGGCATCTTTCCAATGGGCGTTTGATACCTCTGGGCGTATTACCGCAGGTAAATCTATTTCAGTAGGTCTTCCTGATAACGGGGCAAATGGGCGTTATCCTTTAGATTCAGCTATTTCTATTGGTATTGCCATCGGTGATAACGATACAGGTATTAAATGGGTCCGTGACGGTGTTTACGACCTGATGGCCAATGGTATTTCATCTGCTACTATTTTGAATAACGGTATTAATAGTACTAAAAAATTGATGGTTGGTTATAGCCGAGATTCAGGTTCTACTTGGGATTTCCCGAATAATAACCAAGCAATGTTTACTGCGCGTACTGATGTTGATGGCAATAATAACGGCGATGGTCAGACTCATATCGGTTATAGCAGCAATGCTAAAATGTATCACTATTTCCGTGGCGCGGGTCGTATGTCCGTTAGTATGGCCGAAGGGCTTATTGTTGAACCAGGAATTTTAGATATTAAAACCGGTTCCAATAGCGTTGCTATTAGAGCGGACGGAACAATTAACTCCACCCAGCGTATTTCTATGCGTACGGGCTTGTTTTTAAATGGTGATGATAATACTAATGCTTTATCGTTTAAAGCGCCTTCTGGTGTTGATGGTACTAAAACTATCAATTGGGACGCGGGTATTCGTAACGGTCAAAACAAAAACACTGTAACACTTAAAGCTTGGGGTAATTCATTTAATGCAGGCGGCGGTAACAGAGAAACTGTATTTGAAGTATCGGATTCACAAGGTTATTATTTTTATGCCCAGCGTACCAATCCGGCCGTTGCCGGAGGTATAGGACCTGTCAACTTTAAGTTTAACGGAACTATTGAAACAGGTCATATCATAGGCCTTGGTGATATTACTGCTTCCGGTACAGGTTCTTTTGGTGGCAATGTTACCATGACTAATGGCCTGTTTGTCCAAGGTGGTTCTTCTATTACCGGCCAAGTTAAAATCGGTGGAACAGCTGATGCATTAAGAATTTGGAATGCTGAATATGGCGCTATTTTCCGTCGTTCCGAAGATAAGCTTTATATTATTCCAACTCCGCAGAATGCTGGAGAATCAGGTGGTATTTCTAATTTACGTCCGTTCTACATTACATTAAGTACTGGTCAAGTTTCTATGGACCATGTAGTAGATATCGGCGGTGGTAGATTTAAAGTAGATACAACTGGTACTACGGCTGGCCAACGTATTACAGTTAATGCAGCAAGCGATGCTGTTGTATTAAATGCCCCTAATCAAGAATCATCCAACTTTATCCAGGGTCGTAAAGCCAATGTTACTAAATGGTATCTTGGTATTGGCGATGGTGGTAACGTTGTTCGTATGCACAACTATACATATGCGCACGGTATTGCGTTGAATGCTGATACTGTTGATATAACCAAGGCGCTTAAAATTGGTTCCGATATTCGTATTGGTCTTGATGGCAATATTACAGGCAGCACTGCATTAGAAAACTTTAAAAACCTGAACACCACTTTAAACCGTAAAGTTAATGTCGGAACTTGGTCGGGTGGTGCGGCTGCGGGTTGGTATAAATTTGCTACTGTAACTATGCCTCAAAGTGTGGCTACTGCCCAATTTAAAATTACTGGCGGTAACGGATATAATGTCAATTCATCGGAACAAGCCACAATTACTGAAATAGTTCTTAGAACTGGTAATAACAACCCTAAGGGTATTAATGCCACCTTATGGGCGCGCACAGGTAATGGATTTACTAATATAGCAACAATTAATACCTCCGGCGATGACTATGATGTTTACCTATACGTTGGAACTTACGCGGACAAACTTATAGTCGAATATGATTATACAGCAAACACCCGTTATATTTCGGTAGTCGGTCTTAATGATGTGAATCAAACCCCAGTCGCGGAATTACCTACTGGTCACCAGCGCGGACAAGTGTATATGATGTATTCTGATGCTCAGATACCTTATCCGGTGGGTGCTCCGATTCCATGGCCGAGCGATTCAGTTCCAGCCGGATTTGCTTTAATGGAAGGTCAAACCTTTGATACCGGAGCTTATCCTAAACTAGCTGCAGCTTATCCGTCGGGTACTATTCCGGATATGCGTGGACAGACTATTAAAGGTAAACCAAGTGGTCGTGCAGTGTTGAGTGCAGAAGCTGATGGTATTAAGTCTCACAACCATGGCGGCTCTGTTGCGAGTACTGATTTAGGTACTAAAAACACCTCATCATTTGATTATGGTACTAAAAACACCTCATCATTTGATTATGGTACTAAAACCAGCAACACAACAGGTAACCATAACCATAGCGTTAGTGGCAATACTGGCGCAGCAGGTAATCATCAGCACTCACAGACAGGTCCAAGAGGTCCTAATAATCAACCAACAGGAATATTTCCTAATGGAGCTACTCAAATTAGTGGAACCCAGGTTGTTTCTTTTGGCATAAGCAACGGTGTTGTGCCTGGTGTAAACCAATATATTGCAAAGTCATCGACAGAAGGTAACCATACACACTCTTGGTCTGGAACTACAAATACCACCGGTAACCATGCCCACACCGTTGGTATCGGTGCTCATAGTCATTCGGTCGGTATTGGTGCTCATAGTCATTCGGTTGCAATCGGGTCCCACGGTCATGGTCTTACCATAAATAGTACAGGTAATACAGAAAACACGGTTAAAAACATTGCTTTTAACTATATCGTTCGCTTAGCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
54df51c6bd0b450c8deb96ef29e62a5798cb43ba0cfb3a1bdb2f6adf8b5ab7d4
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,4896
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Avian Pathogenic Escherichia coli bacteriophages Nicolas,M., Trotereau,A. and Schouler,C. 2015-06 — GenBank