Protein

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Genbank accession
YP_009505304.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,89
TF
Evidence RBPdetect2
Probability 0,94
Protein sequence
MVDTCNINGVCGTGDWNGPKPGDPNMNDLLLKATPAFGGIDIEFTWPTTNPGAVGTTRLFRSTDANFAGATIRAFVNGNFYFDKTDPGSKVDQRYYYWIQLVSINGTDGDIIGPATATARPLIEQMIEQLTGEIDNGLLSQELRKEIAQIELNKLGITQEEIERAKNDDALGVRLTQIDAKMDQNTAILQEEVRARVTADSSLVQTVNTMYADFNGNIAAIQQENTALATKVNALASSVTTINATVNGDSASGKVGLVAEVQTLDGKVTQIGARWTATVDVNGLVGGFGVYNDGRTVEAGFNVDRFWIGRPGTPKNPGSYPFIIDNNIVYIKEAAIQKLTFDKLRAQDGSFIVQNGKIQADYIEAKDIVVNNIQSDNYQPGVQGWAFRPNGIMEINGTAGTGRMTINNATIKVFDQAGKLRVHIGNLQA
Physico‐chemical
properties
protein length:429 AA
molecular weight: 46361,45190 Da
isoelectric point:4,80400
aromaticity:0,07459
hydropathy:-0,24662

Domains

Domains [InterPro]
DC_1382
STR
25–429
DC_1382
IPR013783
STR
31–112
IPR013783 Coil IPR015406
IPR053171
Unmapped
149–413
IPR053171
YP_009505304.1
1 429
Architecture
STR
STR 25-429
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage Pa2
[NCBI] 		1530400 Uroviricota > Caudoviricetes > Schitoviridae > Litunavirus > Litunavirus Ab09
Host Pseudomonas aeruginosa PAO1
[NCBI] 		208964 Bacteria > Proteobacteria > Gammaproteobacteria > Pseudomonadales > Pseudomonadaceae > Pseudomonas

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009505304.1 [NCBI]
Genbank nucleotide accession
NC_027345.1 [NCBI]
CDS location
range 34171 -> 35460
strand -
CDS
ATGGTAGACACTTGCAACATCAATGGGGTCTGCGGAACCGGGGACTGGAATGGTCCTAAGCCCGGTGACCCCAACATGAATGATCTGCTGCTGAAGGCAACCCCTGCCTTCGGTGGTATCGACATTGAGTTCACTTGGCCAACTACGAACCCAGGTGCAGTTGGCACTACTCGACTGTTCCGAAGCACTGACGCTAACTTCGCTGGTGCAACTATCCGTGCCTTCGTCAACGGTAACTTCTACTTCGACAAGACAGACCCTGGCTCCAAGGTAGATCAACGCTACTACTATTGGATTCAGTTGGTTTCGATCAACGGCACTGATGGGGACATCATTGGTCCAGCCACAGCTACTGCTCGTCCACTCATCGAGCAGATGATTGAGCAGCTTACTGGCGAGATCGACAATGGGTTGTTGTCTCAAGAGCTTCGCAAAGAAATCGCTCAGATCGAACTGAACAAACTGGGGATCACCCAGGAAGAGATTGAACGAGCCAAGAACGATGATGCTCTTGGTGTTCGTCTCACTCAGATCGATGCGAAGATGGATCAGAATACTGCCATCTTGCAGGAAGAGGTTCGTGCTCGTGTAACTGCTGACAGTTCTCTGGTTCAGACAGTCAACACTATGTACGCAGACTTCAACGGGAACATTGCAGCAATCCAACAGGAGAACACTGCACTGGCTACCAAGGTGAATGCCTTGGCTTCGTCTGTGACCACGATCAACGCCACGGTCAACGGTGATTCGGCCTCTGGTAAGGTTGGCTTGGTTGCTGAGGTACAGACTCTGGATGGCAAGGTCACCCAGATCGGTGCCCGCTGGACTGCGACTGTTGATGTGAATGGTTTGGTCGGTGGCTTCGGTGTCTACAACGATGGCCGGACTGTTGAAGCTGGCTTCAACGTAGACCGCTTCTGGATCGGTCGTCCTGGCACTCCGAAGAACCCAGGCAGTTACCCGTTCATCATCGACAACAACATCGTCTACATCAAGGAAGCTGCCATCCAGAAGTTGACCTTCGACAAGCTCAGGGCACAGGATGGCAGCTTTATTGTTCAGAACGGTAAGATCCAGGCTGACTACATCGAAGCCAAGGATATCGTGGTGAACAACATCCAGTCGGACAACTACCAACCAGGTGTCCAAGGCTGGGCATTCCGTCCCAACGGGATCATGGAAATCAACGGTACGGCTGGCACTGGCCGTATGACTATCAACAACGCCACCATCAAGGTGTTTGACCAAGCAGGTAAACTCCGGGTGCACATTGGGAACTTGCAAGCATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
5fb4580ac76f0e3e67715f7f268b957f01980d08bb2d57b0eeba37655eb3acf5
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7854
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Directed in vitro evolution of therapeutic bacteriophage: the Appelmans protocol Burrowes,B.H., Molineux,I.J., Alves,D.R. and Fralick,J.A. 2019-03-11 — GenBank