Protein

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Genbank accession
XOD42687.1 [GenBank]
Protein name
structural protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MAYITGTAANFADLKTAIENVCTANGWALADGILSKNGAFFQLTANAGTYPSLVLRGGTSKTGSTLNGQPTQPQANAGVMIGSPNGNTIVFPINYEIYLFTDPDEVYCVINYNSDFYQQLSFGKSDIPGIGGAAAWFTGSMGTGNSLTSVGGSRVYMSSSQTSCGSQPYNGIACGLWFEQGSAGSYHASFVHSNLDGVSNWRSTSNQTVGTGAYGISYAASLLGSLPNLSNQATILLPVKAIIYRNDAGRTIAANPKNVRYLRIDNVVPGEIITFGADQWKVYPFYRKDATVRNGVSWSTGAQHSGTWGYAIKYTGS
Physico‐chemical
properties
protein length:317 AA
molecular weight: 33551,94930 Da
isoelectric point:8,24733
aromaticity:0,11672
hydropathy:-0,11293

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XOD42687.1
1 317
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,1612
Central domain 11 201 192 0,0099
C-terminal 202 317 115 0,9995
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-201
C-terminal
202-317

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage HHBS29_1
[NCBI] 		3390391 Viruses >
Host Pseudomonas aeruginosa
[NCBI] 		287 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XOD42687.1 [NCBI]
Genbank nucleotide accession
PQ287650 [NCBI]
CDS location
range 16092 -> 17045
strand +
CDS
ATGGCATACATTACAGGAACAGCCGCAAACTTTGCGGATTTGAAAACAGCAATTGAAAACGTTTGCACGGCGAACGGTTGGGCGCTTGCCGACGGCATATTGTCGAAGAACGGGGCTTTCTTCCAGCTTACCGCGAACGCCGGAACGTACCCGTCGCTTGTTCTTCGCGGCGGCACAAGCAAGACCGGCAGTACGTTAAACGGACAGCCAACGCAGCCGCAGGCGAACGCCGGGGTTATGATTGGAAGCCCGAACGGAAATACAATCGTTTTTCCGATTAATTACGAAATTTATTTGTTCACCGACCCGGACGAAGTTTATTGCGTAATTAACTATAATTCGGACTTTTACCAACAACTTTCGTTCGGTAAGTCGGATATTCCGGGCATTGGCGGGGCCGCCGCATGGTTTACCGGAAGTATGGGAACGGGTAACAGCTTGACAAGCGTAGGCGGAAGCCGCGTATATATGTCGTCTTCGCAAACAAGTTGCGGTTCGCAGCCTTACAACGGCATTGCCTGCGGCCTTTGGTTTGAACAAGGTTCGGCGGGTTCGTATCATGCTTCGTTTGTGCATTCGAACTTAGACGGCGTTTCGAATTGGCGTTCTACAAGTAACCAAACCGTTGGAACTGGTGCCTACGGCATTTCTTACGCGGCGTCATTGCTTGGTTCGCTGCCGAACTTGTCGAATCAAGCAACGATATTGCTTCCGGTTAAGGCAATTATTTACAGAAACGACGCAGGGCGAACCATTGCGGCAAACCCGAAAAACGTTCGTTACTTGCGAATCGACAACGTTGTTCCGGGCGAAATTATTACTTTCGGTGCCGACCAATGGAAGGTTTACCCGTTCTATCGAAAAGACGCAACAGTTCGAAACGGCGTTTCTTGGTCAACCGGCGCGCAGCATTCGGGAACTTGGGGTTACGCTATCAAATACACTGGAAGCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
1f66c3f158b315616e7aa5004b1d9f59a667d4f562d9a7e57365a883e1695249
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6289
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50