Protein

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Genbank accession
YP_004300826.1 [GenBank]
Protein name
tail fiber protein proximal subunit
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,61
Protein sequence
MLDTIKKSFRATSGLDAAGEKLINVATADRAVLTDGVNVEYFFQENTIQEYKPDRAYIKGFAVIHNNKIWVSQVDIAEPAGPFTEGKWSPIRVDPKWVLIQGGTRPLRSGEYLTVDSALNTPIAFTLPTDAIDGDTIVIRDVGGRVGYNSVTVAASSQSIRHKGVSVRDFQMTVPYSEMVLVYNNRLWNLFVQAPEEYVSTATTATPFDAQSGQSILRQYLQLSPITIRLPKYANHGDIIQFTGMDHPNVPYYHCIINTFDTNTSVYSPGQKTLEVKYALNGYFIFNSETQTWGLYDGNVADRLRTVSADTNLFPGETVSVVGQDNTTVQTIKLTLPTNVQPGDQITVALNYMRKGQTVKIAAGGTDKILTTQNMMQFPKRSSYPPNGNWLNTLELEFNGSTSYPPIITFAYIPMGPISQWMVVENVPQLERVDPTTNATRGRLGVIALATQLQADLDKEQISDTLNALAREVAITPETLAARVALETRRGIARIATTPEVNQASTATYLDDVIVTPKKLNERVATEDMRGLAEIVSEPEMKDNSNDTHIVTPKKLDSRRATEGLTGVAFVVTKAGAPATIRTGKGTGLFDTEDHGKIVTPLVLGEFKATPNQIGAGFIALESEVIAGTADPVQGPLFVTPAMLHKKTATESRIGLAEIATQAETDAGADDLRFVTPKKLAGRIAKENQTGVSRIATQPEFDAGVLDNVISTPLKIKTYFSGNRLSTQAVSGLTGAGTVWDHYTLDILEATENQRGTLLVATQAITDQGVSDNTIITPKKLQAKKATTTAEGIVRIANAAETNAGVSAITAVCPVNLKNAIQVEKTWEAQTTVRGTVKMTEGALTFVGNDTAGSTQDLELYQKTGYAISPYELNKTLSNFMPLKAKAVDSDKLDGLDSTQFVRRDIDQTVNGSLTLTKHTQFNSSADITGLVTIGRGAGAGTDVDYPNLIIKQGNRNTKFVVSSYDTITEAIFKFGYSSALDNVVTKPIYEIDGPTGVFTFKDAVVADKTVLVKGGVVTNGTVNTTSTGYFIDGNAAITKVGTTELTVGTTGRKLNLTSNDAGNIIAGDASSSYKVLTEKNMNTILNPIYVNKTGDSMSGRLDVSAPVAAKFTGVTQANINQNPTAASIGMWSVEITSPLIYNQLNGYLVPVYENHPDTGLPYVARYDEFKSSGTLSQFGTDLKTTYQIWQPRPTVTTDLHTANTMWIRQFNVAKNAWDGFGRMYSSNLPPTAADIGAISNDGSALNNLRIRDWIQIGNLRIYPDVASRSVKFDWID
Physico‐chemical
properties
protein length:1277 AA
molecular weight: 138433,44080 Da
isoelectric point:5,60673
aromaticity:0,07596
hydropathy:-0,20877

Domains

Domains [InterPro]
DC_1986
ATT
10–137
DC_1986 DC_1209
IPR048391
ATT
1124–1225
IPR048391
YP_004300826.1
1 1277
Architecture
ATT
STR
ATT
STR
ATT 10-137 | STR 344-1123 | ATT 1124-1225 | STR 1226-1259 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_004300826.1
1 1277
Domain Start End Length (AA) Confidence
N-terminal 1 946 946 0,8653
Central domain 947 1145 200 0,2946
C-terminal 1146 1277 131 0,6179
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-946
Central
947-1145
C-terminal
1146-1277

Taxonomy

  Name Taxonomy ID Lineage
Phage Acinetobacter phage 133
[NCBI] 		2919552 Uroviricota > Caudoviricetes > Pantevenvirales > Tevenvirinae > Centumtrigintavirus
Host Acinetobacter johnsonii
[NCBI] 		40214 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Moraxellales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_004300826.1 [NCBI]
Genbank nucleotide accession
NC_015250 [NCBI]
CDS location
range 145796 -> 149629
strand +
CDS
ATGTTGGACACTATCAAAAAGAGTTTTCGCGCGACTTCAGGTCTTGACGCGGCAGGCGAAAAATTAATTAATGTTGCAACAGCCGACCGCGCAGTTTTAACTGATGGTGTAAACGTTGAATATTTCTTCCAAGAAAACACCATTCAAGAATATAAACCAGATCGCGCTTATATAAAGGGCTTTGCTGTTATTCATAACAATAAAATTTGGGTTAGCCAGGTTGATATTGCAGAGCCAGCTGGACCATTTACAGAAGGCAAATGGTCGCCAATTCGAGTAGACCCAAAATGGGTACTTATTCAAGGCGGTACACGTCCGCTCCGATCAGGTGAATATCTTACTGTAGATTCGGCATTAAACACTCCAATTGCGTTTACCCTTCCTACTGATGCAATTGATGGCGACACTATTGTTATTCGAGATGTCGGAGGTCGAGTAGGTTACAATTCAGTAACGGTTGCGGCATCAAGTCAAAGTATCCGCCATAAAGGGGTTTCGGTACGTGATTTCCAAATGACTGTTCCATATTCAGAAATGGTTTTGGTTTATAATAATCGTTTGTGGAACCTATTTGTACAAGCCCCGGAAGAGTACGTTTCAACGGCTACAACTGCAACACCATTTGACGCACAATCAGGTCAATCCATTTTGCGCCAATACTTGCAATTAAGCCCAATTACAATTCGATTACCAAAATATGCGAATCACGGTGACATTATTCAATTCACGGGCATGGACCATCCGAATGTACCATATTATCACTGTATTATTAATACTTTTGACACCAATACTTCGGTTTACAGCCCAGGTCAGAAAACACTTGAAGTTAAATATGCTTTAAACGGCTACTTTATTTTCAACTCTGAAACCCAAACATGGGGCTTATATGATGGTAATGTGGCCGACCGTTTACGTACTGTCTCTGCTGATACTAATTTATTTCCAGGTGAAACCGTATCTGTAGTTGGTCAGGATAACACAACAGTCCAAACCATTAAACTCACTTTGCCTACAAACGTTCAACCAGGTGATCAAATCACTGTGGCTTTGAACTATATGCGTAAAGGTCAAACGGTTAAGATTGCTGCGGGTGGAACAGATAAAATTCTAACTACTCAAAATATGATGCAGTTCCCTAAACGTTCATCATATCCACCAAATGGCAACTGGTTGAACACACTAGAATTAGAATTCAATGGTTCTACTTCGTATCCGCCAATTATTACATTTGCCTACATTCCGATGGGCCCAATTAGTCAATGGATGGTTGTTGAAAACGTGCCTCAACTTGAGCGTGTTGATCCAACAACCAATGCAACCCGTGGTCGCCTAGGTGTTATTGCGCTTGCTACTCAATTGCAGGCTGATTTAGATAAAGAACAGATCAGCGATACATTAAATGCCTTGGCCCGTGAAGTTGCTATCACACCTGAGACTTTAGCTGCTCGTGTTGCTCTCGAAACTCGCCGCGGTATTGCACGTATTGCAACCACACCAGAAGTCAACCAGGCGTCCACTGCAACATATTTGGACGATGTTATAGTTACACCTAAGAAACTTAACGAACGTGTAGCTACGGAAGATATGCGAGGCCTGGCGGAGATTGTGTCAGAGCCTGAGATGAAAGATAACTCAAACGACACACATATTGTAACTCCGAAGAAGCTGGATTCTCGTCGTGCCACCGAAGGCTTAACTGGTGTAGCTTTTGTTGTGACAAAAGCGGGTGCCCCTGCAACGATTCGTACCGGTAAAGGGACTGGGTTATTTGATACTGAGGATCATGGAAAAATTGTAACTCCATTGGTTTTGGGTGAGTTTAAAGCAACGCCAAACCAGATTGGTGCTGGATTTATTGCATTAGAATCTGAGGTTATTGCAGGAACAGCAGACCCTGTGCAGGGCCCATTATTTGTTACTCCTGCAATGTTACATAAAAAGACGGCAACAGAAAGTCGAATCGGGCTTGCTGAAATTGCAACTCAGGCTGAAACCGATGCTGGTGCGGATGATCTTCGTTTTGTAACACCGAAAAAGTTGGCAGGACGTATTGCAAAGGAAAATCAGACGGGCGTTTCACGCATTGCTACGCAACCTGAATTTGATGCCGGTGTATTAGATAATGTAATATCTACTCCATTAAAAATTAAAACTTATTTTAGTGGTAATAGATTATCTACCCAGGCCGTAAGTGGACTAACAGGGGCAGGGACCGTATGGGACCATTATACACTTGATATTCTTGAAGCAACAGAGAACCAACGGGGAACTTTACTTGTTGCTACACAAGCTATTACAGATCAAGGTGTTAGTGATAACACAATTATCACTCCTAAGAAATTGCAGGCTAAAAAAGCGACTACGACGGCGGAAGGTATTGTTAGAATTGCAAACGCAGCTGAAACTAACGCAGGGGTTTCAGCGATTACTGCAGTGTGTCCGGTGAACTTGAAGAATGCTATTCAGGTTGAAAAAACTTGGGAAGCTCAAACAACCGTTCGTGGTACGGTGAAGATGACCGAAGGTGCTTTGACATTTGTTGGTAACGACACTGCTGGAAGTACGCAAGATCTTGAGTTGTACCAAAAAACAGGTTATGCAATTTCACCATATGAACTGAATAAAACATTGTCTAATTTTATGCCATTAAAAGCTAAAGCGGTTGATTCTGATAAATTGGATGGACTTGATTCTACTCAGTTTGTCCGTCGTGATATTGATCAAACCGTCAATGGCTCGTTAACGTTAACAAAACACACTCAATTTAATAGCTCGGCTGATATTACTGGTTTAGTTACTATTGGACGGGGTGCGGGCGCTGGTACTGATGTTGATTATCCAAACTTAATTATTAAGCAAGGTAATCGAAATACTAAATTTGTGGTTTCGTCTTACGATACAATCACTGAAGCAATTTTCAAATTTGGCTATTCATCTGCATTAGATAATGTTGTAACTAAACCGATTTACGAAATCGATGGCCCGACTGGCGTATTCACGTTCAAAGACGCTGTAGTTGCGGACAAAACAGTTTTAGTTAAGGGTGGGGTGGTAACAAATGGAACTGTTAACACAACATCGACCGGTTATTTTATCGACGGTAATGCAGCAATAACAAAAGTTGGAACAACGGAACTGACTGTTGGGACTACAGGACGAAAGCTGAATTTAACTAGTAATGATGCGGGTAATATTATTGCTGGCGACGCTTCTTCGTCATATAAAGTGTTGACAGAAAAAAATATGAACACTATCCTTAATCCGATTTATGTGAATAAGACAGGTGATTCAATGTCAGGTAGATTGGATGTATCCGCACCAGTGGCAGCCAAATTCACTGGAGTGACACAAGCCAATATTAACCAAAACCCTACAGCTGCTTCAATTGGTATGTGGTCGGTTGAAATAACTTCGCCTCTAATATATAACCAGCTGAACGGGTATCTCGTTCCTGTATATGAAAATCATCCTGATACAGGATTACCATACGTTGCCCGTTATGATGAGTTTAAGTCTTCTGGTACATTATCTCAATTTGGTACAGATCTTAAAACGACTTATCAGATCTGGCAACCACGGCCAACCGTAACAACGGATTTGCATACTGCAAATACCATGTGGATTCGACAGTTCAATGTTGCTAAAAATGCGTGGGACGGCTTTGGTCGCATGTATTCAAGCAATTTACCACCAACAGCTGCTGATATTGGCGCGATAAGCAATGATGGATCTGCACTGAATAACTTGCGTATTCGTGATTGGATTCAAATTGGCAACTTGCGTATATACCCTGATGTAGCATCACGTTCAGTTAAATTTGACTGGATTGACTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
44cd4341d10b65fdb19913fbe982f14f96e5c1762aa9e06550d19fa078b99b58
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5458
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50