Protein

View in Explore
Genbank accession
YP_009593401.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,70
Protein sequence
MANLVFKFTWDHRPFPYNTSQGKRQFMLPFASGIPNLAPNFSQVVGTAAISQGGTGATTAADARNNLGAAASGVNSDITEIKGLTTVLSIAQGGTGGNSPSNAKSALGLGDAGVLGYSLTTVASLFSKTLVSEWTSVLGTSRLVNVAHGDWQGGSTANSLYMPQRYGSVLGYYSTDSIGTYAWQLFKGVSGHQMSYRYGAGSDAWSTWGHLKTSFNTSVDSNGFIKAASPVVKLFNDHIELNNDAKKQPIEFKRIDVGDYLLEGSLGFAQEGWYIEVPKDANGNTIVAVVYDTLENGDISIKTYKRKFDFELAAVVADHENPMDIPEGRWIDIRLHEEPEPEPEVEETLTETPVDFQPTNLSQAVAAAMNGVEPPEISDTDETL
Physico‐chemical
properties
protein length:384 AA
molecular weight: 41294,33620 Da
isoelectric point:4,73295
aromaticity:0,09635
hydropathy:-0,25938

Domains

Domains [InterPro]
DC_0709
STR
18–367
DC_0709
IPR058008
RBD
216–336
IPR058008
YP_009593401.1
1 384
Architecture
STR
STR 18-367 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Acinetobacter phage YMC11/11/R3177
[NCBI] 		1628721 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Acinetobacter sp.
[NCBI] 		472 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Moraxellales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009593401.1 [NCBI]
Genbank nucleotide accession
NC_041866.1 [NCBI]
CDS location
range 37898 -> 39052
strand +
CDS
ATGGCAAATCTAGTATTTAAATTTACATGGGATCATCGGCCATTCCCATATAACACCTCACAGGGCAAGCGGCAGTTTATGTTGCCATTTGCGTCAGGTATTCCCAATCTCGCACCCAACTTTTCTCAAGTAGTGGGTACAGCAGCTATCTCTCAAGGTGGTACCGGGGCGACAACCGCAGCAGATGCTCGAAATAATCTTGGAGCTGCTGCTAGTGGTGTAAATAGTGATATTACTGAGATAAAGGGCTTAACTACAGTACTATCTATTGCACAAGGTGGTACAGGGGGCAACTCTCCATCAAATGCAAAGTCAGCGTTGGGTTTAGGTGATGCAGGTGTTCTTGGTTACTCTCTTACTACAGTTGCCTCACTGTTTTCTAAAACTCTTGTTTCCGAGTGGACAAGCGTTTTAGGTACTAGTCGACTTGTTAATGTAGCGCACGGTGACTGGCAGGGGGGTAGTACAGCTAACTCTCTTTATATGCCTCAGCGATATGGTAGCGTCTTGGGTTATTACTCAACCGATTCTATTGGCACATATGCTTGGCAACTATTTAAAGGTGTCTCTGGTCATCAAATGTCTTACCGTTATGGTGCTGGATCTGATGCTTGGTCGACATGGGGGCATTTAAAGACTAGCTTTAATACTTCTGTGGATTCCAACGGTTTCATAAAAGCAGCATCACCAGTAGTTAAGCTATTTAACGACCATATCGAGCTCAATAATGATGCAAAAAAACAGCCGATTGAATTTAAGAGAATTGATGTTGGTGATTATTTACTAGAAGGTTCTTTAGGCTTTGCTCAGGAAGGCTGGTATATCGAAGTACCGAAAGATGCAAACGGCAACACAATCGTCGCAGTAGTGTATGACACCCTAGAAAATGGTGACATCTCAATTAAAACTTACAAGCGTAAGTTTGATTTTGAACTTGCTGCTGTTGTGGCAGATCACGAGAACCCAATGGACATTCCAGAAGGCCGCTGGATTGATATCCGTCTGCATGAAGAACCTGAACCAGAACCTGAGGTTGAAGAAACTTTGACTGAAACACCAGTGGATTTCCAGCCGACTAACTTATCTCAGGCAGTTGCTGCAGCAATGAATGGCGTGGAACCCCCAGAAATCTCAGACACAGACGAAACACTTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
e393b91d3683feb6ff65f980c402c74624f05168c8990183b68d9b43f12446da
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6935
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete Genome Sequence of the Acinetobacter phage YMC11/11/R3177 Jeon,J., Yong,D. and Lee,K. 2015-10-01 — GenBank