Protein

View in Explore
Genbank accession
WYW00212.1 [GenBank]
Protein name
tail protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,63
Protein sequence
MGLVSQSVKNLKGGISQQPDILRFPNQGAQQVNGWSSETQGLQKRPPTKFIKRLGAPGSWGAKPLVHLVNRDASEQYYMVFTGGGVAIVDLQGNSYQVRGYDGYANCADPRGDLRLITVADYTFVVNRRTVVQMGSELTHAGYRNLNTRALVPCRGGQYGRTVSVEVLIDVTWVKLAELALPSGVGEPGVVEGMVAKVDAQNMIKELVTQVNTNGAPWKISAGEYPGCMLLHRDDGGEFGGIRTKDGYADQLINGFIYQVQSFNKLPAQAPEGYLVEITGEATRSGDNYWVRYDGMGRVWKETVKPNIIAGLNRATMPRGLVRAADGQFDWKVLDWNNRGCGDNETNPLPSFVDGTINDVFFFRNRLGFLSGENVIMSRSSRYFNFFPPSVASLSDDDPLDIAVSHNRISILKYAVPFSEQLLLWSDQAQFVLSSQGILSPKTVELNLTTEFDVQDTARPFGIGRGVYFSAPRAAYTSLKRYYAVQDVSDVKNAEDVSAHVPSYIENRVFNIHGSGTENYVTLLSDGAPGIVYLYKFLYMAEDIAQQSWSHWEFGSQVNVLGCASIGSYMYLLMDRPEGIVLERMEFTAFTKDFPVEPYRTYIDGKVTTVCSEFDEDLFLSYINLSSLYGGAPGAQESFWTIDTDGVGQQHSPPRGGWAGDPRIVLQGDQRGKTYIVGRTYTFLYEFSKFLIKQTADDGTTATEDIGRLQLRRAWLNYESSGSFEINVNNNNGRNTDNDFVYVMAGGRLGAEVRLGELNLGTGQFKFPVTGNAQNQRVTIVSDTPNPLNVIGCGYEGNYIRRSSGI
Physico‐chemical
properties
protein length:806 AA
molecular weight: 89163,06160 Da
isoelectric point:5,41331
aromaticity:0,11042
hydropathy:-0,29119

Domains

Domains [InterPro]
IPR058003
TTP
1–806
IPR058003
WYW00212.1
1 806
Architecture
TTP
TTP 1-806
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WYW00212.1
1 806
Domain Start End Length (AA) Confidence
N-terminal 1 145 145 0,9951
Central domain 146 355 211 0,0707
C-terminal 356 806 450 0,1220
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-145
Central
146-355
C-terminal
356-806

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage vB_PpuP-Keeri
[NCBI] 		3132629 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas putida KT2440 and
[NCBI] 		1481724 Heterolobosea > Eutetramitea > Lyromonadida > Psalteriomonadidae > Monopylocystis >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WYW00212.1 [NCBI]
Genbank nucleotide accession
PP496425 [NCBI]
CDS location
range 24884 -> 27304
strand +
CDS
ATGGGTCTGGTTAGTCAGTCCGTAAAGAACCTGAAGGGTGGCATTAGCCAACAGCCGGACATCCTCCGGTTCCCCAATCAGGGTGCGCAACAAGTTAACGGCTGGTCGAGCGAGACCCAAGGTCTTCAGAAGCGACCGCCAACGAAGTTCATTAAGCGTCTCGGGGCACCGGGTTCGTGGGGCGCTAAGCCTCTCGTCCACTTGGTCAACCGTGATGCGTCCGAACAGTATTACATGGTGTTCACTGGTGGTGGCGTTGCCATTGTGGACCTTCAAGGGAACAGCTATCAGGTGCGTGGTTACGATGGCTATGCCAACTGTGCGGACCCTCGTGGAGACCTGCGCCTGATCACTGTAGCCGACTACACGTTCGTTGTGAATCGCCGAACCGTTGTTCAGATGGGCAGTGAGCTGACCCACGCTGGTTACCGAAACCTCAACACACGGGCGCTCGTTCCGTGCCGTGGTGGTCAGTATGGGCGCACGGTCTCCGTTGAGGTCCTTATCGACGTGACGTGGGTGAAGCTGGCTGAGCTGGCCCTACCTTCGGGTGTGGGCGAGCCGGGTGTGGTAGAGGGCATGGTTGCCAAGGTCGATGCTCAGAACATGATCAAGGAGCTTGTGACCCAAGTGAACACTAACGGCGCTCCGTGGAAGATCAGCGCTGGCGAGTATCCGGGCTGCATGTTGCTTCACCGCGACGACGGTGGAGAGTTCGGTGGTATCCGCACCAAGGATGGCTATGCTGACCAGTTGATCAATGGCTTCATCTATCAGGTCCAGTCGTTCAATAAGTTGCCCGCTCAGGCCCCTGAAGGTTACCTCGTGGAAATCACCGGGGAAGCCACACGCTCAGGAGACAACTACTGGGTCCGTTACGACGGTATGGGCCGTGTCTGGAAGGAAACCGTTAAGCCCAACATCATCGCTGGGTTGAACCGGGCGACAATGCCTCGTGGTCTGGTCCGTGCGGCTGACGGTCAGTTTGACTGGAAGGTCCTCGACTGGAACAACCGTGGCTGTGGCGACAACGAGACCAACCCGCTGCCTTCCTTCGTGGACGGTACGATCAATGACGTGTTCTTCTTCCGTAACCGTTTGGGGTTCCTCTCAGGCGAGAACGTGATCATGAGCCGGTCGTCGCGGTACTTCAACTTCTTCCCACCAAGCGTGGCGAGCCTGTCCGATGATGACCCTCTGGACATCGCGGTATCCCACAACCGTATCTCCATCCTCAAGTACGCCGTTCCGTTCTCCGAACAGTTGCTGCTGTGGTCTGACCAAGCTCAGTTCGTGTTGTCCTCTCAGGGCATCCTGTCTCCCAAGACGGTCGAGCTGAACCTGACCACTGAGTTCGACGTACAGGACACCGCTCGGCCTTTCGGTATCGGACGTGGTGTGTACTTCTCGGCCCCTCGTGCGGCCTATACGAGCCTCAAGCGTTACTACGCAGTGCAGGACGTATCGGACGTGAAGAACGCCGAGGACGTATCAGCGCACGTTCCGAGCTACATCGAGAACCGGGTGTTCAACATCCACGGCTCGGGTACAGAGAACTATGTGACCCTGCTGTCTGACGGCGCTCCGGGTATCGTGTACCTCTACAAGTTCCTCTACATGGCTGAAGACATTGCGCAACAGTCTTGGAGTCACTGGGAGTTCGGGTCTCAGGTCAACGTGCTGGGCTGTGCTTCGATTGGCTCCTACATGTACCTCCTGATGGATCGCCCTGAAGGGATCGTACTGGAGCGCATGGAGTTCACAGCGTTCACCAAGGACTTCCCTGTGGAGCCTTATCGGACCTACATCGACGGCAAGGTGACAACTGTGTGCAGTGAGTTCGATGAAGACTTGTTCTTGTCGTACATCAACCTGTCCAGCCTGTATGGTGGCGCACCGGGCGCACAGGAATCCTTCTGGACCATCGACACTGATGGCGTAGGGCAGCAACACTCACCTCCGAGAGGTGGCTGGGCGGGCGACCCACGGATCGTCCTTCAGGGCGACCAACGGGGCAAGACGTACATCGTTGGCCGAACCTACACGTTCCTCTATGAGTTCTCGAAGTTCCTGATCAAGCAAACCGCTGATGATGGGACCACGGCCACTGAGGACATTGGTCGGTTGCAGCTCCGTCGAGCTTGGCTGAACTATGAGTCTTCTGGTTCGTTCGAGATCAACGTGAACAACAACAATGGCCGCAACACGGACAACGACTTCGTGTACGTCATGGCTGGTGGACGACTCGGCGCTGAGGTTCGCCTCGGTGAACTGAATCTCGGGACTGGTCAATTCAAGTTCCCGGTAACGGGTAACGCCCAGAACCAACGGGTGACCATCGTGAGCGACACACCGAACCCACTCAACGTGATCGGCTGTGGCTATGAGGGTAACTACATCCGTCGATCCAGCGGTATTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
8dd1a57a2cf6c5cf0d5ed089d00d595eefe6712e00967201c907a6a0a3b82367
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2836
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and characterization of a phage collection against Pseudomonas putida Brauer,A., Rosendahl,S., Kangsep,A., Rikberg,R., Lewanczyk,A.C., Horak,R. and Tamman,H. — — GenBank