Protein

View in Explore
UniProt accession
A0A8S5QIJ0 [UniProt]
Protein name
Transcription initiation factor TFIID subunit, DNA, Nuclear
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,90
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MTSNLDQAVVAIATTAAEAKKLAAIGPTVNEEGHLLFNGKKLATLITPSTLSANVAQALGSDDTASRLYQEQSEFETQQVNANTRIALENGVYYIEDALPADLKNKVRTRWYETNERPEEALKIVQLIQAFLDKLPSNVYISSRGGVFPTTKNKGYAPDFYGEDNRTLSRGVKLNGQPHTITMTLHGGQSCLSLRRFMFNTIDFSKAWFIVEEMGQDVFHLCDGSEGNRIIHGGNIRTRAYLKYGYVRGADLDKMLFRPIDGWTKERPHIGTGLGEKGTSEGGLNSTTYPIVDNACFLNNSLITEHITQFPGFNKDKIFDLIRSESGERYLSAGGYFDENGESAFPQPDGTTSRSWGNWRGCQAGSRGYGWRIFGTKNTRVEYFDVRGFNGGAVVCGLYGTPKGEDIGARDSVKAYEKGIVAVNTKISGGYFTHNYICGVEAIRVSGWELCGIYAPDSVVGHPDAHLEHTRGIGGGTSLDPGYQQCTSRYLPMDNLYIHDCVFGLGMRKVMDIHVGNNVKIINNSGRAMYYGISTVIEEIFAGQLIDPSNPRGSKDTPDPNSFYYQDCNIEVRGNVIVSGLFGLHPVNGAKGVKTRKDAGKWFLRCHQVWEGNIVYAPRGMLCNFGHNHFLVENNMFTFALPFGGFYGLNQISQIRVTNGGSGYTSPPKVVITGGGAEAFDGAGRAKIKDGKVIDIIVERMGSRYTEPPTVTLVGGGGTGATAEAYVNSFTYAMQIGAEGNYGTMLGSKIMGNYAQNSPDGNFIRQFVIGNLRGSIFACNFADVTPYSSVEKAKKPFGDPYISKSIKYRDGLGSFGFYGGALETCEVWGNFVFDQLTDKLEIWTGDNARGSVHAKYLPTGHQDVLNAIKFKALEMQLAALQEEVANMKLKATTTPSPAQPQPPQNADSGSQGATGTPEATSEQQPPKADSSSGQGGTATAQPTTPVAPAPTTPAPVTPANPPANSDQAQSQPAAKPETSIKFTFDGVETTATEAVGSDGAAKLKTLNNSIKSGEPEGWVGAFGEVDGHKVMYASAAGTDKGVRYIESDGIGSDGSSDSAIIVPIKISATSSNGGSFAALVLNGRNIVNSGLLVTDADGGFKLRPVDGTTVNGQPISAGKIYEYDKWHVAVITVKSGDERRFDKVRFGLNHAGNSGRSVTIGAGIEFVQGDISKAAEKAATLMTEYGIS
Physico‐chemical
properties
protein length:1188 AA
molecular weight: 127602,39540 Da
isoelectric point:6,17427
aromaticity:0,09259
hydropathy:-0,33325

Domains

Domains [InterPro]
DC_0832
ATT
201–847
DC_0832 Coil
A0A8S5QIJ0
1 1188
Architecture
ATT
ATT 201-847 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
A0A8S5QIJ0
1 1188
Domain Start End Length (AA) Confidence
N-terminal 1 107 107 0,9684
Central domain 108 868 762 0,9768
C-terminal 869 1188 319 0,4366
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-107
Central
108-868
C-terminal
869-1188

Taxonomy

  Name Taxonomy ID Lineage
Phage Myoviridae sp. ctGkq5
[NCBI] 		2825074 Uroviricota > Caudoviricetes >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
DAE18627.1 [NCBI]
Genbank nucleotide accession
BK015659 [NCBI]
CDS location
range 1262 -> 4828
strand -
CDS
ATGACATCAAACCTAGACCAAGCCGTTGTAGCGATTGCGACAACGGCTGCGGAAGCCAAAAAACTGGCCGCCATCGGACCTACCGTCAATGAAGAGGGTCATTTGCTGTTTAATGGCAAAAAACTGGCTACGCTGATCACGCCGTCTACTTTGTCTGCCAATGTCGCGCAGGCTTTGGGCAGTGATGACACCGCCTCGCGCCTGTACCAAGAGCAAAGCGAATTTGAAACGCAACAAGTCAACGCAAACACGCGTATTGCGTTGGAAAACGGCGTGTATTACATCGAGGACGCGCTGCCCGCAGATTTAAAAAACAAGGTGCGCACGCGCTGGTACGAAACCAATGAGCGTCCCGAAGAGGCTCTAAAAATTGTGCAGTTAATCCAGGCGTTTTTGGACAAGCTGCCGTCAAACGTATACATAAGCTCCCGCGGGGGCGTGTTCCCGACGACCAAAAACAAAGGGTATGCGCCGGATTTCTACGGTGAGGACAACCGTACGTTAAGCCGAGGCGTTAAGTTGAATGGTCAGCCTCATACCATCACGATGACTCTGCATGGCGGTCAATCGTGTTTGTCGCTGCGCCGATTTATGTTTAATACCATCGACTTCAGTAAGGCGTGGTTTATCGTCGAGGAGATGGGGCAAGACGTATTCCACCTGTGCGACGGGTCTGAGGGTAACCGAATTATCCACGGCGGTAATATCCGCACCCGGGCGTATCTCAAATATGGTTACGTTCGCGGGGCTGATTTAGATAAGATGCTGTTCCGCCCCATTGATGGGTGGACGAAAGAGCGTCCGCACATTGGTACCGGATTGGGCGAAAAAGGTACAAGTGAGGGCGGGCTTAATAGCACGACCTATCCGATAGTCGATAATGCCTGCTTCCTTAACAACAGCCTAATTACTGAGCATATTACCCAGTTCCCAGGCTTCAACAAGGACAAAATTTTCGACCTGATTCGCTCCGAGTCGGGCGAACGGTATCTCAGCGCGGGCGGGTATTTCGACGAAAACGGTGAGTCAGCATTCCCGCAGCCCGATGGGACAACCTCCCGCAGTTGGGGCAACTGGCGCGGCTGCCAAGCGGGTAGCCGAGGGTATGGCTGGCGTATCTTCGGTACCAAAAATACACGCGTTGAGTATTTTGACGTCCGAGGTTTTAATGGCGGCGCGGTGGTCTGTGGTTTGTATGGTACGCCGAAGGGCGAAGACATCGGCGCGCGAGATTCGGTTAAAGCCTATGAAAAAGGTATCGTTGCCGTCAATACCAAAATTTCCGGCGGATATTTCACGCACAACTATATCTGCGGCGTAGAGGCCATCAGGGTGTCAGGTTGGGAGTTGTGCGGTATCTATGCCCCCGACTCCGTCGTTGGCCATCCCGACGCACATCTTGAGCATACACGCGGCATCGGCGGTGGTACGTCGCTTGATCCAGGGTATCAACAATGCACCTCGCGCTATTTGCCGATGGACAATCTGTACATCCACGACTGCGTATTCGGTTTGGGGATGCGCAAAGTCATGGATATTCACGTCGGAAACAATGTAAAAATCATCAACAACTCCGGACGTGCGATGTATTACGGAATCAGTACGGTAATCGAAGAGATTTTTGCCGGGCAATTAATTGATCCTAGCAATCCTAGAGGTAGCAAAGATACTCCTGACCCAAACAGTTTTTATTATCAGGACTGTAATATTGAGGTGAGAGGAAACGTTATCGTGAGCGGGTTGTTTGGGTTGCACCCGGTCAATGGAGCGAAAGGCGTTAAAACCCGTAAAGACGCGGGGAAATGGTTCTTGCGCTGCCACCAAGTCTGGGAGGGTAACATTGTCTACGCCCCGCGCGGCATGTTATGTAACTTTGGCCACAACCACTTTTTGGTCGAAAATAATATGTTCACTTTCGCGTTGCCGTTTGGGGGTTTTTACGGTCTTAACCAGATTTCGCAAATCAGGGTAACCAATGGCGGTAGCGGTTATACGTCTCCTCCCAAAGTAGTGATTACCGGTGGCGGTGCAGAGGCCTTTGACGGAGCCGGACGCGCCAAGATTAAAGATGGCAAGGTCATCGACATCATCGTGGAGCGCATGGGTAGCCGCTATACCGAGCCGCCGACCGTTACGCTGGTTGGTGGCGGAGGTACGGGGGCGACGGCGGAGGCTTATGTTAACAGCTTCACCTACGCAATGCAGATCGGTGCGGAGGGTAATTACGGGACAATGTTAGGGTCCAAGATTATGGGTAATTACGCGCAAAACTCCCCGGACGGTAATTTTATACGGCAATTTGTGATTGGTAATTTAAGAGGTTCGATTTTCGCGTGCAACTTTGCGGATGTAACACCTTATTCCAGCGTTGAAAAAGCTAAAAAGCCGTTTGGTGATCCATATATAAGCAAGTCTATCAAGTATCGAGACGGCTTAGGTAGTTTTGGTTTTTATGGTGGCGCGCTCGAAACCTGCGAGGTTTGGGGTAATTTTGTTTTTGACCAATTAACCGATAAGCTGGAGATTTGGACTGGAGACAATGCAAGAGGCAGTGTACATGCAAAATACCTGCCTACCGGTCATCAAGATGTCCTTAATGCCATCAAGTTTAAGGCTCTTGAGATGCAACTTGCCGCGTTGCAAGAAGAGGTGGCTAATATGAAACTTAAAGCCACAACTACACCGAGTCCGGCTCAACCTCAACCGCCTCAAAATGCTGACAGCGGCTCACAAGGCGCGACAGGTACTCCAGAGGCTACGAGTGAGCAACAACCGCCAAAAGCAGATAGCAGCAGTGGACAAGGCGGTACAGCTACTGCACAGCCGACAACGCCTGTGGCTCCGGCACCGACAACACCGGCACCTGTAACGCCAGCTAACCCACCGGCAAATAGCGATCAGGCGCAAAGCCAGCCTGCGGCCAAGCCTGAAACGTCCATCAAATTTACGTTTGACGGCGTGGAAACGACGGCTACTGAGGCTGTCGGCAGCGATGGCGCGGCTAAGCTGAAAACCTTAAACAACTCCATCAAATCGGGCGAACCCGAAGGCTGGGTTGGCGCGTTTGGAGAGGTTGATGGGCATAAAGTCATGTATGCGAGTGCGGCCGGTACGGATAAAGGCGTACGCTATATTGAGAGTGATGGCATTGGGTCTGATGGCTCATCAGATAGTGCAATCATTGTGCCAATTAAAATATCTGCAACATCGAGCAATGGAGGGTCTTTTGCGGCGCTAGTTCTGAATGGCCGCAATATCGTCAACTCAGGTCTGCTGGTGACGGACGCCGATGGCGGATTTAAGTTGCGACCTGTTGACGGTACGACCGTTAACGGACAACCAATTTCCGCCGGCAAAATCTACGAATATGATAAATGGCATGTTGCCGTTATCACTGTTAAATCAGGCGATGAACGTCGATTTGATAAAGTGAGATTTGGCCTTAATCATGCGGGTAACTCGGGTCGTAGCGTAACGATTGGCGCAGGCATCGAGTTTGTTCAAGGCGACATCAGTAAGGCAGCCGAAAAAGCCGCTACGCTGATGACGGAGTACGGGATCAGTTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
2560f66af44823727ae3f1a43a9766b25d4e0f39b09d7c76576d6458e94e73fe
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8028
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50