Protein

View in Explore
Genbank accession
QQO90244.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,91
Protein sequence
MSLARVKSSMLDGGNSPVGNVLMKTTDKVVAFAPPSELEKIQRAGTAQFDTQSGLFTIVFPDGTQATVSGLPTADQLKSGREGTQGKQGIPGTPGADGRDGRDGAPGCPGVKGERGRIGPTGDTGPIGATGDTGPVGPTGPTGPTGNPGRDSAIDDYAAAQVLDPLTGQPIPNAYIASNRDLNTGFTQNMGRQIFSRNQDTVHVIFNTPFINRCASLNITFLNASVNQAKTYAIYNLDGTSASNENFLLGGFILKSTGQNVADWDFFYQATGD
Physico‐chemical
properties
protein length:273 AA
molecular weight: 28346,03950 Da
isoelectric point:5,04147
aromaticity:0,06960
hydropathy:-0,38645

Domains

Domains [InterPro]
DC_0452
ATT
1–59
DC_0452 PTHR24637
IPR008160
STR
85–145
IPR008160 DC_0380
IPR008160
STR
98–151
IPR008160
QQO90244.1
1 273
Architecture
ATT
STR
RBD
ATT 1-59 | STR 85-151 | RBD 152-273
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Erwinia phage pEa_SNUABM_5
[NCBI] 		2797313 Uroviricota > Caudoviricetes > Rivsvirus >
Host Erwinia amylovora
[NCBI] 		552 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QQO90244.1 [NCBI]
Genbank nucleotide accession
MW366843.1 [NCBI]
CDS location
range 62405 -> 63226
strand -
CDS
ATGAGTTTAGCAAGAGTTAAGTCCAGTATGCTCGACGGTGGCAACAGCCCCGTCGGTAACGTACTGATGAAGACAACGGATAAAGTAGTAGCCTTTGCGCCGCCCAGCGAGCTTGAAAAGATTCAACGTGCGGGTACCGCTCAGTTTGATACTCAAAGTGGTCTGTTTACCATCGTGTTTCCAGACGGTACTCAAGCCACTGTTTCAGGACTGCCTACAGCAGATCAGCTTAAAAGCGGTCGTGAAGGTACACAGGGCAAGCAAGGTATTCCGGGTACTCCAGGCGCTGATGGTCGTGATGGACGCGACGGTGCTCCTGGTTGTCCTGGTGTTAAAGGTGAGCGGGGGCGTATTGGACCTACTGGTGACACGGGTCCTATCGGTGCTACTGGTGACACAGGCCCTGTTGGACCTACGGGCCCTACCGGACCTACGGGTAACCCAGGACGTGACAGCGCGATTGACGATTATGCAGCAGCACAGGTGCTTGACCCACTTACAGGTCAGCCTATTCCAAACGCATACATTGCCTCTAACCGCGATCTGAATACCGGCTTTACTCAGAACATGGGTCGTCAGATTTTCTCACGCAACCAAGACACTGTTCACGTAATCTTCAACACACCATTTATCAACCGTTGCGCCAGTTTAAACATCACGTTCTTGAATGCTTCTGTAAATCAAGCCAAGACGTATGCCATCTACAATCTGGATGGTACCAGCGCATCCAACGAGAACTTCCTGCTTGGTGGATTCATCCTTAAATCCACTGGACAGAACGTTGCGGATTGGGACTTCTTTTACCAGGCAACGGGGGATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
6b78c87b7abe690a881e6b89d1be9526ac53991e148bebc030e0a757c1861206
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7079
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of Erwinia phage pEa_SNUABM_5 Kim,S.G., Lee,S.B., Kwon,J. and Park,S.C. 2021-01-07 — GenBank