Protein

View in Explore
Genbank accession
YP_009203194.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,88
Protein sequence
MAITDVWYDAAKTGKNYYSMNEFPGTGGDTFDINFAGGYLDQTHVRAYMVKEGEVDVEILTLTFLTAARVKTSKPVQVGYKCVIYRDTPKSLPLLSFKDGTPMTATNLDRNAMQAIFSAAEMVDRYESTTATVGDIGGAVVDFDKTIKEMKAQLEKVQGQITKSVFATASTANYNIEVGNTSTLRVGLVQPLTNLTVTLKDAPGATNRIVVIFRQDRGTNKVKWPGNVRWPNGSPPPLSWTQGAEDVFELYTPDSGATWFGMFSGGWYA
Physico‐chemical
properties
protein length:269 AA
molecular weight: 29478,00750 Da
isoelectric point:5,55996
aromaticity:0,10781
hydropathy:-0,23532

Domains

Domains [InterPro]
IPR005604
ATT
29–131
IPR005604 Coil
DC_1864
STR
57–269
DC_1864
YP_009203194.1
1 269
Architecture
ATT
STR
ATT 29-131 | STR 132-269
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Yersinia phage vB_YenP_ISAO8
[NCBI] 		1675027 Uroviricota > Caudoviricetes > Autographivirales > Melnykvirinae > Aghbyvirus
Host Yersinia enterocolitica
[NCBI] 		630 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009203194.1 [NCBI]
Genbank nucleotide accession
NC_028850.1 [NCBI]
CDS location
range 33298 -> 34107
strand +
CDS
ATGGCTATCACAGACGTATGGTACGATGCTGCCAAAACTGGCAAGAACTACTACTCCATGAATGAGTTCCCTGGAACTGGTGGCGATACTTTCGACATCAACTTCGCAGGTGGATATCTCGACCAGACTCATGTTCGGGCCTATATGGTCAAAGAAGGTGAAGTCGATGTAGAGATTCTAACCCTGACATTCCTTACTGCTGCTCGTGTTAAGACGAGTAAGCCAGTACAAGTTGGTTACAAGTGCGTCATCTACCGCGACACTCCGAAGTCTCTGCCTCTGCTGAGCTTTAAGGACGGTACGCCGATGACAGCTACCAACCTCGACCGTAACGCAATGCAGGCTATCTTCTCTGCTGCTGAAATGGTTGACCGATACGAATCGACTACGGCTACCGTGGGCGACATCGGCGGCGCTGTGGTGGACTTTGACAAGACCATCAAGGAGATGAAAGCTCAACTGGAGAAGGTCCAGGGGCAGATTACCAAATCGGTGTTTGCCACGGCGAGCACTGCAAATTATAACATCGAAGTCGGCAACACGTCAACTCTGCGTGTCGGCCTCGTACAACCACTGACCAACCTGACCGTAACCCTCAAGGATGCGCCAGGTGCTACGAATCGCATTGTGGTTATCTTCCGTCAGGACCGTGGCACCAACAAGGTGAAATGGCCTGGCAACGTGAGATGGCCTAATGGTTCGCCACCGCCTCTATCCTGGACTCAGGGTGCTGAGGATGTGTTCGAACTGTATACGCCTGATTCTGGTGCTACGTGGTTCGGAATGTTCTCAGGAGGCTGGTATGCTTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
63904b10d1f6916bfa0d1f49da851d8cb3ba9fcacc2674d47815de6018631efb
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8329
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of bacteriophage vB_YenP_ISAO8 which infects Yersinia enterocolitica O:8 Leon-Velarde,C.G., Kropinski,A.M. and Chen,S. 2014-10-28 — GenBank