Protein

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Genbank accession
XQU50035.1 [GenBank]
Protein name
tail sheath protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,70
Protein sequence
MSLNLVSPGVKVREVDLTVGRIDPVFDQVGGFVGPFAKGPVGVPVLIETEQDLLATFGKPSEVDGQNEYWLTASAYLSYGGVLNVVRADSSSLVNSHVSVTDSAVAGLKITGTEDYENNHINDTTWKFAARNPGSWADELKIAVIDNAADQRLGLGTFGLQVGYAVTVGVSTSYAGTDGTVKTFNGYLKSIITQINVGSVDVKILSKYDIDNDEWSEAEYTQSGLGRILGGSNQYIQAFNNVGVADSLEKLRSTDGGTVSSGSTSIQFPSGFDLTILDENDFITSLNGTFTGRIHSVDNTNNIVFSDTASPVSLASTTIVFKYARSANDGTDARGEGLLTDSGFTAIDWYEQQKISLASGDVFWKNIAPKPGTSNYAAERKTKNDEVNIVVIDDKGAVSGVAGNILEKFNSLSKANDGRVTPAQNVHYKTFLAQRSAYVFAGNQDTLLSPGFTSLGGYALQSGASIAWNQDATSVTFGVLGNKTYTLAHGGDYGVTKYDVTLGDILTGYEKFRNPSDVSVNYLINGPSGGDTIFESQAKINKLIDIANERKDCVVTASPHKGGVVNVTNPDTQTRNVIDFFDGCTSSSYAVFDSGYKYTFDRFNNKFLYIPLNGDIAGLMCRTSISSFPWFSPAGAQRGTINNAVKLAYNPSQTQRDLLYPQRINPVIFSPGAGVILFGDKTALSYSSAFDRINVRRLFLTIESAIQRAARAQLFEFNDVITRTNFLNIVEPYLRDVQAKRGITEFLVVCDESNNTPDVVDANQFRADIFVKPARSINFIGLTFVANRTGVSFEEVVGTV
Physico‐chemical
properties
protein length:800 AA
molecular weight: 86368,15220 Da
isoelectric point:4,93541
aromaticity:0,10125
hydropathy:-0,13737

Domains

Domains [InterPro]
G3DSA:3.40.50.11780
STR
28–187
G3DSA:3.40.50.11780 G3DSA:3.40.50.11780 IPR020287
DC_1098
STR
132–465
DC_1098 IPR035089
IPR052042
Unmapped
585–781
IPR052042
XQU50035.1
1 800
Architecture
STR
STR
TAS
TAS
STR 28-465 | STR 469-651 | TAS 652-683 | TAS 687-785 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XQU50035.1
1 800
Domain Start End Length (AA) Confidence
N-terminal 1 168 168 0,7299
Central domain 169 416 249 0,5821
C-terminal 417 800 383 0,2527
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-168
Central
169-416
C-terminal
417-800

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage S-SCSM2R
[NCBI] 		3400247 Viruses >
Host Synechococcus sp.
[NCBI] 		1131 cellular organisms > Bacteria > Bacillati > Cyanobacteriota/Melainabacteria group > Cyanobacteriota > Cyanophyceae

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XQU50035.1 [NCBI]
Genbank nucleotide accession
PQ898602 [NCBI]
CDS location
range 110074 -> 112476
strand +
CDS
ATGTCGCTTAATCTAGTATCACCAGGCGTAAAGGTTAGGGAAGTTGACCTAACTGTCGGAAGAATTGATCCTGTATTTGACCAAGTTGGTGGTTTCGTCGGACCCTTTGCTAAAGGTCCAGTTGGAGTACCAGTTCTGATCGAAACGGAGCAAGATCTTCTAGCAACATTTGGTAAGCCCAGCGAGGTTGATGGTCAAAACGAGTATTGGCTGACCGCTTCCGCTTACCTTTCTTATGGTGGAGTACTAAACGTAGTTAGAGCAGACTCTTCTAGTTTAGTAAACTCCCACGTATCAGTAACCGACTCTGCAGTAGCAGGTCTTAAGATTACTGGAACCGAAGACTACGAAAACAATCATATTAATGATACTACTTGGAAGTTCGCAGCAAGAAACCCAGGTAGTTGGGCAGATGAACTAAAAATCGCAGTTATCGATAACGCAGCTGACCAAAGACTAGGACTTGGTACCTTCGGTCTTCAAGTCGGTTATGCAGTAACAGTTGGTGTTTCCACTTCCTATGCAGGAACAGATGGAACAGTTAAGACATTCAACGGATATCTAAAGAGTATCATTACTCAGATTAACGTTGGTAGTGTTGACGTTAAGATTCTCAGTAAGTACGACATCGACAATGATGAGTGGTCAGAAGCTGAGTACACCCAGAGTGGTTTAGGTAGAATCCTTGGTGGATCAAACCAATACATCCAAGCGTTTAACAACGTTGGTGTTGCAGATTCCTTGGAGAAACTAAGATCTACAGATGGTGGAACAGTTTCTTCTGGTTCTACTTCTATCCAGTTCCCAAGTGGTTTTGATCTTACCATCCTAGATGAGAACGATTTTATCACTTCTCTGAACGGAACATTCACTGGAAGAATTCATTCTGTTGATAATACCAACAACATTGTTTTCTCCGATACTGCATCTCCAGTATCCCTTGCATCTACGACCATCGTATTTAAGTATGCAAGAAGTGCAAATGATGGTACTGATGCTAGAGGTGAAGGTCTTCTAACTGATAGTGGATTCACTGCAATTGACTGGTATGAGCAACAGAAGATTTCCCTAGCAAGTGGTGATGTCTTCTGGAAGAACATTGCTCCAAAACCAGGTACTTCCAATTACGCTGCAGAAAGAAAGACCAAGAATGATGAAGTCAACATCGTTGTCATTGACGATAAAGGTGCAGTAAGTGGTGTTGCAGGTAATATCCTTGAGAAGTTTAACTCACTTTCCAAGGCAAATGACGGAAGAGTCACTCCTGCACAGAATGTACACTATAAGACATTCCTGGCACAAAGATCTGCATATGTCTTTGCTGGAAACCAAGATACTCTACTCTCTCCTGGATTTACTTCTCTAGGTGGATATGCACTTCAAAGTGGTGCTTCTATTGCATGGAACCAAGATGCAACCTCGGTAACATTTGGTGTTCTAGGTAATAAGACATACACTCTTGCACATGGTGGAGACTATGGTGTCACCAAGTATGATGTAACTCTAGGTGATATCCTCACTGGTTACGAGAAGTTCAGAAATCCTTCTGATGTTTCTGTCAACTATCTGATCAATGGACCTTCTGGTGGAGATACAATTTTTGAATCTCAAGCAAAGATCAACAAACTGATTGATATTGCAAATGAGAGAAAGGATTGTGTTGTAACTGCATCCCCACATAAAGGTGGTGTTGTCAACGTAACTAACCCAGATACTCAAACAAGAAACGTCATCGACTTCTTCGATGGTTGTACTTCTTCTTCCTATGCAGTATTTGATTCTGGTTATAAGTACACCTTTGATAGATTTAACAACAAGTTCCTCTATATCCCACTAAACGGAGATATTGCAGGTCTGATGTGCAGAACTTCTATCTCCAGTTTCCCATGGTTCTCGCCAGCGGGTGCTCAGAGAGGCACAATCAACAATGCAGTTAAACTTGCATATAACCCATCCCAAACACAGAGAGATCTCCTCTATCCACAGAGAATTAACCCAGTTATCTTCTCGCCTGGTGCAGGTGTCATCCTCTTCGGTGATAAGACCGCACTATCCTATTCATCTGCATTCGATAGAATCAACGTCCGTCGTCTATTCCTCACTATTGAGTCTGCAATCCAACGTGCTGCTCGCGCTCAACTCTTCGAGTTCAACGATGTTATCACAAGAACTAACTTCTTGAATATTGTCGAACCATATCTCCGTGATGTTCAAGCGAAGAGAGGAATCACTGAGTTCCTAGTTGTTTGCGACGAGTCAAATAACACTCCAGATGTTGTTGACGCAAACCAGTTCAGAGCAGACATCTTCGTCAAACCAGCAAGATCGATCAACTTCATCGGTCTCACATTCGTAGCTAACAGAACTGGAGTTAGCTTTGAAGAGGTTGTTGGAACCGTCTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
88cc9c406ed106a727b24ca6c01a8c9c7a82cfc79e193597f3aaf4f18b7a960b
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2790
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Unveiling a novel broad-host-range cyanophage cross-infecting Prochlorococcus and Synechococcus hosts Wei,S., Cai,L., Zhang,R., Xu,Y. and Li,J. 2025-12-09 — GenBank